Clone BO30018 Report

Search the DGRC for BO30018

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:300
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptObp59a-RB
Protein status:BO30018.pep: Imported from assembly
Sequenced Size:640

Clone Sequence Records

BO30018.complete Sequence

640 bp assembled on 2012-04-24

GenBank Submission: KX794021

> BO30018.complete
GAAGTTATCAGTCGACATGAAACAGTTGATTTTCCTGCTGATTTGTTTGA
GCTGCGGCACCTGCTCCATTTACGCACTGAAATGCAGATCCCAGGAGGGA
CTAAGTGAAGCGGAGCTCAAGCGAACTGTGCGCAACTGTATGCATCGCCA
GGACGAGGACGAAGATCGAGGACGAGGTGGACAGGGCCGGCAAGGAAATG
GCTATGAGTACGGTTACGGAATGGATCACGATCAGGAGGAGCAGGACAGG
AATCCAGGCAACAGGGGCGGCTATGGCAATCGAAGGCAGCGAGGACTAAG
GCAATCGGATGGCAGGAACCACACCAGCAACGATGGAGGTCAGTGTGTGG
CCCAGTGCTTTTTCGAGGAGATGAATATGGTGGATGGCAATGGGATGCCC
GATCGGCGCAAGGTGAGCTATTTGCTGACCAAGGACCTTCGGGACCGGGA
GCTGCGCAACTTCTTCACGGACACCGTGCAGCAGTGCTTCCGCTATCTGG
AGAGCAACGGAAGGGGCCGGCACCACAAGTGTTCAGCGGCCCGGGAACTG
GTCAAGTGCATGTCGGAGTACGCGAAGGCGCAGTGCGAGGATTGGGAGGA
GCACGGCAACATGCTCTTCAATGCAAGCTTTCTAGACCAT

BO30018.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Obp59a-RB 609 CG13517-PB 1..606 17..622 3030 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Obp59a-RB 1011 CG13517-RB 23..628 17..622 3030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22702717..22703081 17..381 1825 100 Plus
2R 25286936 2R 22703160..22703403 379..622 1220 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:45:14 has no hits.

BO30018.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:36 Download gff for BO30018.complete
Subject Subject Range Query Range Percent Splice Strand
Obp59a-RB 1..606 17..624 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:06 Download gff for BO30018.complete
Subject Subject Range Query Range Percent Splice Strand
Obp59a-RB 23..628 17..624 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:31 Download gff for BO30018.complete
Subject Subject Range Query Range Percent Splice Strand
Obp59a-RB 23..628 17..624 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:31 Download gff for BO30018.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22702717..22703079 17..379 100 -> Plus
2R 22703161..22703403 380..624 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:06 Download gff for BO30018.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18590222..18590584 17..379 100 -> Plus
arm_2R 18590666..18590908 380..624 99   Plus

BO30018.pep Sequence

Translation from 16 to 640

> BO30018.pep
MKQLIFLLICLSCGTCSIYALKCRSQEGLSEAELKRTVRNCMHRQDEDED
RGRGGQGRQGNGYEYGYGMDHDQEEQDRNPGNRGGYGNRRQRGLRQSDGR
NHTSNDGGQCVAQCFFEEMNMVDGNGMPDRRKVSYLLTKDLRDRELRNFF
TDTVQQCFRYLESNGRGRHHKCSAARELVKCMSEYAKAQCEDWEEHGNML
FNASFLDH

BO30018.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
Obp59a-PB 202 CG13517-PB 1..202 1..202 1114 100 Plus