BO30056.complete Sequence
802 bp assembled on 2011-09-15
GenBank Submission: KX799414
> BO30056.complete
GAAGTTATCAGTCGACATGAATGATCAGCCAGTCGATGGCGTCGTGCGCC
TTCGTCTCAAGGTGGCCCAGTGGATCTACGGCATTGCGGCGCTGTTCATT
GTCCTGGCCATTGGGCTGCTCATCTTGCCGGGCCTGTTCAGACGATACCT
CCTGGTTCCGGATGTAGTGGCTACCTATTGCTTCTTTGTCATCGGATTGG
TCACCCTGTGCGTCTATGTCAACGTCACTTGGCTGCGCCGGAAGTTCCCC
TTCAACTGGATAGTCAGCTGCTGCATAGCAGCCTGTCTGGCACTGGGAAC
GGTGTGTATCCTTTCAAACCAGCGGACGGGACACGTCCTGCTGCTGAGCA
TGGAGATTCTTGTCATGATGGCGCTGCTCCTGCTGGTCGGCTCATATCTA
TTGCCCGAATGCCCTGCAATGGCCTACTTGTTCCTCACTTGGTTCATATT
CGTTGTGCTCTCCTCCGTCCTAATGGCCGCCGTTTGTGTACACGTTTCAG
ATCAGATATTCTCCTATGAAGTAGCCACCCACTTTGTGCTCTGGCAAGTT
ATATGCCCATTGATTGTGTTCCAGGCGCAGGTCATATCCGGCTATTGGGA
GAATTTACCGCCAATTCTGGATAGGCCGCTGTGCTCCACGATGCTCCTGT
TCGACTTTCTCGCCTGCTACATCTTTCTTGACTCCGCCAATGACGTTGGT
TTTGAGTTCTACTACGCTGGCCAGACGGCAAATCAAAAGTTTTTGTCCAG
ATCCGTTAAGAGCCAGTGGGAGATGTTCATGGATGCAAGCTTTCTAGACC
AT
BO30056.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:37:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43779-RA | 771 | CG43779-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:37:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43779-RA | 836 | CG43779-RA | 1..768 | 17..784 | 3840 | 100 | Plus |
CG16825-RB | 3020 | CG16825-RB | 1201..1968 | 784..17 | 3840 | 100 | Minus |
CG16825-RA | 1888 | CG16825-RA | 69..836 | 784..17 | 3840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:36:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13305988..13306755 | 784..17 | 3840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:36:59 has no hits.
BO30056.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:06 Download gff for
BO30056.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15639-RB | 1..768 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:04 Download gff for
BO30056.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16825-RA | 67..836 | 17..786 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:00 Download gff for
BO30056.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16825-RA | 67..836 | 17..786 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:00 Download gff for
BO30056.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13305986..13306755 | 17..786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:04 Download gff for
BO30056.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13305986..13306755 | 17..786 | 99 | | Minus |
BO30056.pep Sequence
Translation from 16 to 802
> BO30056.pep
MNDQPVDGVVRLRLKVAQWIYGIAALFIVLAIGLLILPGLFRRYLLVPDV
VATYCFFVIGLVTLCVYVNVTWLRRKFPFNWIVSCCIAACLALGTVCILS
NQRTGHVLLLSMEILVMMALLLLVGSYLLPECPAMAYLFLTWFIFVVLSS
VLMAAVCVHVSDQIFSYEVATHFVLWQVICPLIVFQAQVISGYWENLPPI
LDRPLCSTMLLFDFLACYIFLDSANDVGFEFYYAGQTANQKFLSRSVKSQ
WEMFMDASFLDH
BO30056.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43779-PA | 256 | CG43779-PA | 1..256 | 1..256 | 1342 | 100 | Plus |