Clone BO30056 Report

Search the DGRC for BO30056

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:300
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG15639-RB
Protein status:BO30056.pep: Imported from assembly
Sequenced Size:802

Clone Sequence Records

BO30056.complete Sequence

802 bp assembled on 2011-09-15

GenBank Submission: KX799414

> BO30056.complete
GAAGTTATCAGTCGACATGAATGATCAGCCAGTCGATGGCGTCGTGCGCC
TTCGTCTCAAGGTGGCCCAGTGGATCTACGGCATTGCGGCGCTGTTCATT
GTCCTGGCCATTGGGCTGCTCATCTTGCCGGGCCTGTTCAGACGATACCT
CCTGGTTCCGGATGTAGTGGCTACCTATTGCTTCTTTGTCATCGGATTGG
TCACCCTGTGCGTCTATGTCAACGTCACTTGGCTGCGCCGGAAGTTCCCC
TTCAACTGGATAGTCAGCTGCTGCATAGCAGCCTGTCTGGCACTGGGAAC
GGTGTGTATCCTTTCAAACCAGCGGACGGGACACGTCCTGCTGCTGAGCA
TGGAGATTCTTGTCATGATGGCGCTGCTCCTGCTGGTCGGCTCATATCTA
TTGCCCGAATGCCCTGCAATGGCCTACTTGTTCCTCACTTGGTTCATATT
CGTTGTGCTCTCCTCCGTCCTAATGGCCGCCGTTTGTGTACACGTTTCAG
ATCAGATATTCTCCTATGAAGTAGCCACCCACTTTGTGCTCTGGCAAGTT
ATATGCCCATTGATTGTGTTCCAGGCGCAGGTCATATCCGGCTATTGGGA
GAATTTACCGCCAATTCTGGATAGGCCGCTGTGCTCCACGATGCTCCTGT
TCGACTTTCTCGCCTGCTACATCTTTCTTGACTCCGCCAATGACGTTGGT
TTTGAGTTCTACTACGCTGGCCAGACGGCAAATCAAAAGTTTTTGTCCAG
ATCCGTTAAGAGCCAGTGGGAGATGTTCATGGATGCAAGCTTTCTAGACC
AT

BO30056.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:37:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43779-RA 771 CG43779-PA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:37:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG43779-RA 836 CG43779-RA 1..768 17..784 3840 100 Plus
CG16825-RB 3020 CG16825-RB 1201..1968 784..17 3840 100 Minus
CG16825-RA 1888 CG16825-RA 69..836 784..17 3840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13305988..13306755 784..17 3840 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:36:59 has no hits.

BO30056.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:06 Download gff for BO30056.complete
Subject Subject Range Query Range Percent Splice Strand
CG15639-RB 1..768 17..786 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:04 Download gff for BO30056.complete
Subject Subject Range Query Range Percent Splice Strand
CG16825-RA 67..836 17..786 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:00 Download gff for BO30056.complete
Subject Subject Range Query Range Percent Splice Strand
CG16825-RA 67..836 17..786 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:00 Download gff for BO30056.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13305986..13306755 17..786 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:04 Download gff for BO30056.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13305986..13306755 17..786 99   Minus

BO30056.pep Sequence

Translation from 16 to 802

> BO30056.pep
MNDQPVDGVVRLRLKVAQWIYGIAALFIVLAIGLLILPGLFRRYLLVPDV
VATYCFFVIGLVTLCVYVNVTWLRRKFPFNWIVSCCIAACLALGTVCILS
NQRTGHVLLLSMEILVMMALLLLVGSYLLPECPAMAYLFLTWFIFVVLSS
VLMAAVCVHVSDQIFSYEVATHFVLWQVICPLIVFQAQVISGYWENLPPI
LDRPLCSTMLLFDFLACYIFLDSANDVGFEFYYAGQTANQKFLSRSVKSQ
WEMFMDASFLDH

BO30056.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43779-PA 256 CG43779-PA 1..256 1..256 1342 100 Plus