Clone BO30068 Report

Search the DGRC for BO30068

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:300
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG30356-RA
Protein status:BO30068.pep: Imported from assembly
Sequenced Size:481

Clone Sequence Records

BO30068.complete Sequence

481 bp assembled on 2011-09-15

GenBank Submission: KX798227

> BO30068.complete
GAAGTTATCAGTCGACATGGGACGTGCTGTAAAAAATAATAGAGTAAGGT
CGGCCCATTGCAACAGTGCCGCCAAGGCGACGTCAATCAGTGGACATTCG
ATGCTAAAGCAAAACAACGATTGCAATGGACGCAACCCGTTCTTTCAGTT
TCTGGCCTACTTTCGAAAATGTTCCAACAACTGCCTTGGCCACTTGCCGT
CGGATCGGGTAACTCTAATTGCCGGCAAGGTGTGGAATTACATGAGTCTG
TCGGAGAAAGAACCCTTTATCGCTGCTGCGCGAAGATTTAACTACACGTA
TCGATCGCGGAGCAGAAAAGTCAACTGGGTCCTGGCGCAACTGCGAAAAT
CCGCTGCTGGGGAAGAATGCCGACCACAGGCACAGTGGATGTTGATGAAC
TTTTTAAAGTCTTGGCAGGAATCTGTGGTGAGGAACCTTCTCGACCTGGA
TCACAATCAAAACGCAAGCTTTCTAGACCAT

BO30068.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG30356-RA 450 CG30356-PA 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG30356-RA 538 CG30356-RA 37..483 17..463 2235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8729019..8729465 463..17 2235 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:35:12 has no hits.

BO30068.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:03 Download gff for BO30068.complete
Subject Subject Range Query Range Percent Splice Strand
CG30356-RA 38..484 17..465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:27 Download gff for BO30068.complete
Subject Subject Range Query Range Percent Splice Strand
CG30356-RA 37..483 17..465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:25 Download gff for BO30068.complete
Subject Subject Range Query Range Percent Splice Strand
CG30356-RA 37..483 17..465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:25 Download gff for BO30068.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8729017..8729465 17..465 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:27 Download gff for BO30068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4616522..4616970 17..465 99   Minus

BO30068.pep Sequence

Translation from 16 to 481

> BO30068.pep
MGRAVKNNRVRSAHCNSAAKATSISGHSMLKQNNDCNGRNPFFQFLAYFR
KCSNNCLGHLPSDRVTLIAGKVWNYMSLSEKEPFIAAARRFNYTYRSRSR
KVNWVLAQLRKSAAGEECRPQAQWMLMNFLKSWQESVVRNLLDLDHNQNA
SFLDH

BO30068.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG30356-PA 149 CG30356-PA 1..149 1..149 798 100 Plus