BO30072.complete Sequence
850 bp assembled on 2011-09-15
GenBank Submission: KX798711
> BO30072.complete
GAAGTTATCAGTCGACATGTCCAAGCTGGGTGCTATCTTGTTGGTGGGCT
TGTGCCTGTTTGTGGCCGTGGCCTTGGCCGAGCCACGCCTTCAGCACGTT
CAGGGGCGCAATCAGGTGCAGGGTCAAAGGGCGCAGCAGCATCCCTACCT
CTTCCTGTCAATTCCCAAGGGTCGGGCCAACGCCGGCGCCGTCGTCCAGG
GCTTCGAAATTGTCGAGGAGGAAGATGATGATCTACATGATGAGGACCAG
CACGATGACGAGACGGAGGATGACGAGGAACTGGAGCATCAGCTGGGCCT
GAACTTTGCCCGCAGCGGTCTGGCTTACAGGCAGAACCACGCTGATGACG
AACAGGACGATGATCAGGATCAGGAGCAGGATCACGTTCAGGATGAGCTG
CCCAAGAAGCAGATGATGGTTAACCGGGATCAGGCTGGTGCCATTATGGT
GCCCGATGGCATTATCGAGATCGAGGGTCAGAGTGTTCTGGACGAGAAGA
CCGGCAAGGCGGCTCTCCTAGTGCCTCGTGCCGCCCTAGACGCCATTCCC
GATGGCGCGGTGGTGGCTCTTATGGAGCGATCCGCCTCATCCGTTGATGA
AATCGAGGAAGAGCGCGCCAACCGCGTGGTAGTTCGTCGCCGCAAGAACA
ACGGACGCAGGAACATTCGCCGCCGCGGCATCAACAACAACAATATCCGA
CGCCGCCGCCCCGCCCAAAGGCGTCGCCGAGTGGGTGGCAACCGCAGGCG
CAATGTACGCGTCATTCGCCCCCAAGGCGGCAACCGTAGGCGTGGCAACC
AGAGGCGCCGCGGACAGGTCGTATTCCAGGGTGCAAGCTTTCTAGACCAT
BO30072.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-RA | 819 | CG3598-PA | 1..816 | 17..832 | 4080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-RA | 1047 | CG3598-RA | 102..917 | 17..832 | 4080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2937128..2937943 | 17..832 | 4080 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3279..3352 | 649..722 | 118 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2442 | 640..703 | 115 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2431 | 640..695 | 109 | 66.1 | Plus |
BO30072.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:04 Download gff for
BO30072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 1..816 | 17..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:33 Download gff for
BO30072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..917 | 17..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:31 Download gff for
BO30072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..917 | 17..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:31 Download gff for
BO30072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2937128..2937943 | 17..834 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:33 Download gff for
BO30072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2831161..2831976 | 17..834 | 99 | | Plus |
BO30072.pep Sequence
Translation from 16 to 850
> BO30072.pep
MSKLGAILLVGLCLFVAVALAEPRLQHVQGRNQVQGQRAQQHPYLFLSIP
KGRANAGAVVQGFEIVEEEDDDLHDEDQHDDETEDDEELEHQLGLNFARS
GLAYRQNHADDEQDDDQDQEQDHVQDELPKKQMMVNRDQAGAIMVPDGII
EIEGQSVLDEKTGKAALLVPRAALDAIPDGAVVALMERSASSVDEIEEER
ANRVVVRRRKNNGRRNIRRRGINNNNIRRRRPAQRRRRVGGNRRRNVRVI
RPQGGNRRRGNQRRRGQVVFQGASFLDH
BO30072.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-PA | 272 | CG3598-PA | 1..272 | 1..272 | 1388 | 100 | Plus |
