Clone BO30133 Report

Search the DGRC for BO30133

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:301
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptECSIT-RA
Protein status:BO30133.pep: Imported from assembly
Sequenced Size:1261

Clone Sequence Records

BO30133.complete Sequence

1261 bp assembled on 2011-09-12

GenBank Submission: KX795691

> BO30133.complete
GAAGTTATCAGTCGACATGCTGCGCCGCGCACAATGCCTGCTCCGGCTGC
ACGGCAATGGAGGCCATTCGCTGGTCAGCCGCTTTCGAAACTACGCTACG
GACGAGGGAAATCCGAAACAGAACCCGAATCCAAATCCCAGGGCACAAAA
ACCCGGCACCAAAAACCTGCCGGCTTTAAGGAACCCCTTTGCCGCCGCCC
AGGACAGGACGAAAAACAGCTACCTGACCATGGTGGAGATATTCCAGGAG
CGCGACGTCCACCGTCGGAACCATGTGGAGTTCATCTACGCGGCACTCAA
GAATATGGCGGATTTCGGGGTGGAAAGAGACTTGGAGGTCTACAAGGCCC
TGATCAACGTGATGCCCAAGGGCAAGTTCATACCCACCAACATGTTCCAG
GCAGAGTTCATGCACTACCCCAAACAGCAGCAGTGTATCATTGATCTGCT
TGAGCAGATGGAAGATTGCGGGGTGATGCCCGATCACGAGATGGAGGCGA
TGCTGCTTAATGTGTTTGGCAGGCAGGGACATCCACTGCGCAAGTATTGG
CGCATGATGTACTGGATGCCAAAGTTTAAGAACCTATCACCGTGGCCACT
GCCCGATCCTGTTCCGGATGATACATTGGAAATGGCCAAGCTGGCGCTAG
AGCGGATGTGCACGGTCGACCTGCGGTCCAAAATCACGGTTTTCGAGACC
AGCGAGCTGAAGGATGCCATTGACGATACGTGGATCGTGAGCGGAATGAG
TCCCGAGCAGGAGAAACTGCTGCGGGAGCACTCTCGCCAGAAAGCTCTGT
ACATCGAGGGACCCTTTCACATATGGCTTAGGAATCGCCGGATCAACTAC
TTTACCCTGCGCGCTGATGCAGATTCTGAGTTCCTGTCTGAATTAGATGA
GCGGCAGCTGGACGAGGACGATGTCTCCCACATCGAAGTACCCTTCTTTG
GTCGTGCTCCACCAAGGCGACACAACCAGCTGGGAAAGCTGCGCTCTGTC
CACCAACAGGACGACGGAACCATTATGGCCATCTGTGCCACAGGCACCTC
CACAAAGGACTCATTGCTCTCGTGGATTCGCCTGTTGGAAGCGAACGGAA
ATCCCTCCATAGGAGAGGTGCCCGTCCTCTTCCGGTTCACATCCGAAGTG
CCAGCCAAGGCGGAGGAAATTGAAGGTGGCGCCAGTGTCCCGGCAACAAG
TGATAACAGTAGTCAAGATGAGCACATTAGCAGTAGACAGAAAGCAAGCT
TTCTAGACCAT

BO30133.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
ECSIT-RA 1230 CG10610-PA 1..1227 17..1243 6135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
ECSIT-RA 1330 CG10610-RA 87..1313 17..1243 6135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5856671..5857897 17..1243 6135 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:16:59 has no hits.

BO30133.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:45 Download gff for BO30133.complete
Subject Subject Range Query Range Percent Splice Strand
ECSIT-RA 87..1313 17..1245 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:53 Download gff for BO30133.complete
Subject Subject Range Query Range Percent Splice Strand
ECSIT-RA 87..1313 17..1245 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:23 Download gff for BO30133.complete
Subject Subject Range Query Range Percent Splice Strand
ECSIT-RA 87..1313 17..1245 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:23 Download gff for BO30133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5856671..5857897 17..1245 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:53 Download gff for BO30133.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1682393..1683619 17..1245 99   Plus

BO30133.pep Sequence

Translation from 16 to 1261

> BO30133.pep
MLRRAQCLLRLHGNGGHSLVSRFRNYATDEGNPKQNPNPNPRAQKPGTKN
LPALRNPFAAAQDRTKNSYLTMVEIFQERDVHRRNHVEFIYAALKNMADF
GVERDLEVYKALINVMPKGKFIPTNMFQAEFMHYPKQQQCIIDLLEQMED
CGVMPDHEMEAMLLNVFGRQGHPLRKYWRMMYWMPKFKNLSPWPLPDPVP
DDTLEMAKLALERMCTVDLRSKITVFETSELKDAIDDTWIVSGMSPEQEK
LLREHSRQKALYIEGPFHIWLRNRRINYFTLRADADSEFLSELDERQLDE
DDVSHIEVPFFGRAPPRRHNQLGKLRSVHQQDDGTIMAICATGTSTKDSL
LSWIRLLEANGNPSIGEVPVLFRFTSEVPAKAEEIEGGASVPATSDNSSQ
DEHISSRQKASFLDH

BO30133.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
ECSIT-PA 409 CG10610-PA 1..409 1..409 2169 100 Plus