Clone BO30137 Report

Search the DGRC for BO30137

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:301
Well:37
Vector:pDNR-Dual
Associated Gene/Transcripthfw-RA
Protein status:BO30137.pep: Imported from assembly
Sequenced Size:1867

Clone Sequence Records

BO30137.complete Sequence

1867 bp assembled on 2011-10-14

GenBank Submission: KX796526

> BO30137.complete
GAAGTTATCAGTCGACATGCTCGCGTACACCCACGGCACATGGCTCCTGC
TCCTGCTGCTCCTTGTAGCAGGCGCATGCGCGCGGCCAGAAATAGCACAC
ACACCGGATCCGGCTGCACTAGGCGAGGAGTCTACTCCACATGCACACGC
ACATCCACAGGCTCGCCATCATCACCATGCCCATCCCCATGCGCCGCTGA
AGGAAGATGAGCAGGGAACAGCAATACCTGCTCCCATCCTAACAACTGAT
AACGTGGGCATTGGGGAAACCACGACGGCATCAAGTTTGGCCGAGACGCA
AAGCATGTCCGATCCGGGATCTGTGACAGACACAACATCCACAAGCACAT
CGCACTCCACCTCGACCACGTCGACCACTTCGCCCGCACCCCTTCCGCCG
GCTGCTCCCGAACAGCCCGAGTATCTGAAGCACTGCTTCTATGCAGAAGA
GCAGCTGTGTGGCCACACCTTTGACGGACGAGCCGAAACCTCCGAGGGCC
AGGGCTCGACAGTCGCGCAGTCGGAAGCCCAGAACCGAGGAGGACAGGGG
AACAGCCAGTGCCAGTGCAGGGAGCACCCGACGCGGCCAAACTCCTGGTA
CTGCTGCAACATATCGCAGCTGACGATGATCTCAAGCTGCAGCAACATAT
CCAAGTGGACCAACCTGCACGTGCGCAACATGACTGTGGAGGACATGGAC
CTCTCCAATCCAATATTCCGATCCCTGCAGTCGCTTGCCGTGACGGACGG
CAATATCACTCGACTGGTGAACGCCTTTCCGCGGCTCTCGGCTCTTAAGT
GCCTAAACATATCAAACAACAACATCTCGGAGATCCACTCGAGGGCGGTG
AAGGACGTGCCCCATCTGGAGTTCTTCGGCATGTCGAACAACAATCTCTC
GCTGGTGCCTCACCGAAACCAGAACAAGAACATTACGCTGGATATCAGTG
GCAACATGCGCATGCTGTGCACTCCGCTAAACGAGATAATATACACCGAA
TCTATTAATTTCCTGAACCCGAAGCACTCCTACTGTCAGTATAACGCCAC
ACACACCTGGTTTCAGTCCACGGACAAGGTGTCCGTGGAGCAGCTGGAGA
ACAGAAAGCGGTGTGTGACTAATTGTCCGGTTATTCCGAACTACGGCAGC
TGCAATTGTACGCTGGAGAATATTATGATCATACAGGACAACCAGTCGAA
GCCCCAGTGCCACGTAGACTGTTCCAATCTTGGCCTGGTGGAGCTACCCC
AAAGACTGCCGGACAACACATTTATGCTCAATATCACAAACAACAAGATA
ACCAGCCTGGGCGATTACTTCCATACCAATCCCACCTACCACAATATTAA
CCGTCTCTTGGCCGATAACAACCAGATATCCTCCATCTATGAGTTCGAGG
GTACCAAGTTCATCGAAACCTTTCAGCGCATCTACATGCGAAACAATTCG
CTGAGCAAGATTCCGGAGTACTTTCTCAACAATGCCCTGATGGACTCTGG
CCTGGGCCGTCGTATTTACCTGGCAGGCAACAAGCTGCAGTGCGACTGCA
ACTCGGCAAAGACGCTGCAAAATTGGCTTAAGGAGCGTAGCTCCGATATA
CCCGACTATATGGAGATACGCTGTCGCAACATGCCCCAGAGAGTCATCGA
ACTGCAGGAGGCCAAACTATGCCAGTCCCCACCAGACTGGACCGATTACA
TATACTATTTAATAGCCGCCGAGGTCCTGCTGCTGCTCGCCCTTATTACC
AAGGTGTCCTACGACTATTGGGTCTTCAAGACGGCTGGCTATCTGCCCTG
GCCGGCCAGTAAAATGCCCAAGTTGCCATGCGATTGGCTGTGCGAATCGG
CAAGCTTTCTAGACCAT

BO30137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:43:21
Subject Length Description Subject Range Query Range Score Percent Strand
hfw-RB 1836 CG3095-PB 1..1833 17..1849 9165 100 Plus
hfw-RA 1836 CG3095-PA 1..1833 17..1849 9165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
hfw-RB 3038 CG3095-RB 347..2183 13..1849 9185 100 Plus
hfw-RA 2540 CG3095-RA 347..2183 13..1849 9185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1670816..1671729 35..948 4570 100 Plus
X 23542271 X 1671783..1672297 945..1459 2575 100 Plus
X 23542271 X 1672362..1672753 1458..1849 1960 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:43:20 has no hits.

BO30137.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:56:33 Download gff for BO30137.complete
Subject Subject Range Query Range Percent Splice Strand
hfw-RA 328..2160 17..1851 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:08:03 Download gff for BO30137.complete
Subject Subject Range Query Range Percent Splice Strand
hfw-RA 351..2183 17..1851 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:54 Download gff for BO30137.complete
Subject Subject Range Query Range Percent Splice Strand
hfw-RA 351..2183 17..1851 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:54 Download gff for BO30137.complete
Subject Subject Range Query Range Percent Splice Strand
X 1669920..1669937 17..34 100 -> Plus
X 1670816..1671729 35..948 100 -> Plus
X 1671787..1672297 949..1459 100 -> Plus
X 1672364..1672753 1460..1851 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:08:03 Download gff for BO30137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1563953..1563970 17..34 100 -> Plus
arm_X 1564849..1565762 35..948 100 -> Plus
arm_X 1565820..1566330 949..1459 100 -> Plus
arm_X 1566397..1566786 1460..1851 99   Plus

BO30137.pep Sequence

Translation from 16 to 1867

> BO30137.pep
MLAYTHGTWLLLLLLLVAGACARPEIAHTPDPAALGEESTPHAHAHPQAR
HHHHAHPHAPLKEDEQGTAIPAPILTTDNVGIGETTTASSLAETQSMSDP
GSVTDTTSTSTSHSTSTTSTTSPAPLPPAAPEQPEYLKHCFYAEEQLCGH
TFDGRAETSEGQGSTVAQSEAQNRGGQGNSQCQCREHPTRPNSWYCCNIS
QLTMISSCSNISKWTNLHVRNMTVEDMDLSNPIFRSLQSLAVTDGNITRL
VNAFPRLSALKCLNISNNNISEIHSRAVKDVPHLEFFGMSNNNLSLVPHR
NQNKNITLDISGNMRMLCTPLNEIIYTESINFLNPKHSYCQYNATHTWFQ
STDKVSVEQLENRKRCVTNCPVIPNYGSCNCTLENIMIIQDNQSKPQCHV
DCSNLGLVELPQRLPDNTFMLNITNNKITSLGDYFHTNPTYHNINRLLAD
NNQISSIYEFEGTKFIETFQRIYMRNNSLSKIPEYFLNNALMDSGLGRRI
YLAGNKLQCDCNSAKTLQNWLKERSSDIPDYMEIRCRNMPQRVIELQEAK
LCQSPPDWTDYIYYLIAAEVLLLLALITKVSYDYWVFKTAGYLPWPASKM
PKLPCDWLCESASFLDH

BO30137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
hfw-PB 611 CG3095-PB 1..611 1..611 3300 100 Plus
hfw-PA 611 CG3095-PA 1..611 1..611 3300 100 Plus
swi2-PA 499 CG14485-PA 132..499 237..601 286 25.7 Plus