Clone BO30144 Report

Search the DGRC for BO30144

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:301
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG10467-RA
Protein status:BO30144.pep: Imported from assembly
Sequenced Size:1126

Clone Sequence Records

BO30144.complete Sequence

1126 bp assembled on 2011-09-12

GenBank Submission: KX797114

> BO30144.complete
GAAGTTATCAGTCGACATGGTCAACGTCACGGAAGACGTCTTCGCCAACG
GAGCGGTGAATCCGTTCACCAAGTCAAAGGACACCATCAAGCGGTTCACC
CTGACAAATGGAGCTGGAATGTCCGTGCAATTGATCACCCGTGGAGCCAC
CATTACCAGCATAAAGACGCCTGATGCCAGCGGTCAAATAGATGACGTGA
CCCTCGGATTTGACGATTTGGCGGGCTATCAGAGCGAGAGAAATCCGTAT
TTTGGAGCAACCATTGGGCGGGTTTGCAACCGGATTGCCAATGGCAGCTT
TTATCTTGATGGAAAGCTAGTTCAGGTGTCTAAGAACCGAGACAACAAGT
TTCAGCTCCATGGCGGCTTTGTAGGCTTCGATAAGGCTCACTGGGAAGTT
GTGGAAGTGCGTGTGGATGGTGTTACCCTGTCCCACACCAATCCCGATGG
ACACGAAGGCTATCCCGGCAAGGTGACAGCCACGGCAAGCTTTACCCTCA
GCGAGGATAACTGCCTCCATGTCCAGATGAGTGCACTAGCAGATAAAACC
ACTCCCGTGAATCTCACCAACCACTCCTATTTCAACCTAGCTGGCCACAA
ATCTGGAGCCAACGGTCTCTACGAGCACACCATCGAGATAAATGCTTATG
GAATCACTGAGACGGATCAGTCTTCCATTCCCACCGGCCGTATCACACCC
GTAGAGGGAACAGGATTTGATTTACGTGTGTCCAGCAATCTGGGTGAACG
CCTCAAGGCGCTGCAGCCAGCTCGCGGCTACGATGACAACTTCTGTGTGA
CCTTCAGTCCACCACAACCATTGGCCAAGGTGGCCAGAGCCACTCATCCG
CCCAGCGGACGCTGGCTGGAGGTGGTCAGCAATCAGCCCGGAGTGCAGTT
CTACACCTCCAACTTTATGCCAGACGTGGAACGCGGTGAATCGCCCATTC
CCGGCAAGGATGGAGCTGCCTATGCCAAGCATTGTGCCTTCTGCCTGGAG
ACACAAAAGTTTCCCGACTCCGTGAACCACAGCAACTTTCCCTCGACCAT
TTTGCGACCTGGCGAAAGTTACCAGCACGAAGTCATCTACAAGTTCGGAG
TTTCTCACGCAAGCTTTCTAGACCAT

BO30144.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10467-RA 1095 CG10467-PA 1..1092 17..1108 5460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10467-RA 1544 CG10467-RA 353..1444 17..1108 5460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6093304..6094395 1108..17 5460 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:19:16 has no hits.

BO30144.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:47 Download gff for BO30144.complete
Subject Subject Range Query Range Percent Splice Strand
CG10467-RA 342..1433 17..1110 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:11:54 Download gff for BO30144.complete
Subject Subject Range Query Range Percent Splice Strand
CG10467-RA 353..1444 17..1110 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:12 Download gff for BO30144.complete
Subject Subject Range Query Range Percent Splice Strand
CG10467-RA 353..1444 17..1110 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:12 Download gff for BO30144.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6093301..6094395 17..1110 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:11:54 Download gff for BO30144.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6086401..6087495 17..1110 99   Minus

BO30144.pep Sequence

Translation from 16 to 1126

> BO30144.pep
MVNVTEDVFANGAVNPFTKSKDTIKRFTLTNGAGMSVQLITRGATITSIK
TPDASGQIDDVTLGFDDLAGYQSERNPYFGATIGRVCNRIANGSFYLDGK
LVQVSKNRDNKFQLHGGFVGFDKAHWEVVEVRVDGVTLSHTNPDGHEGYP
GKVTATASFTLSEDNCLHVQMSALADKTTPVNLTNHSYFNLAGHKSGANG
LYEHTIEINAYGITETDQSSIPTGRITPVEGTGFDLRVSSNLGERLKALQ
PARGYDDNFCVTFSPPQPLAKVARATHPPSGRWLEVVSNQPGVQFYTSNF
MPDVERGESPIPGKDGAAYAKHCAFCLETQKFPDSVNHSNFPSTILRPGE
SYQHEVIYKFGVSHASFLDH

BO30144.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10467-PA 364 CG10467-PA 1..364 1..364 1936 100 Plus
CG32445-PA 367 CG32445-PA 1..361 1..361 943 49.3 Plus
CG32444-PA 370 CG32444-PA 3..361 2..365 887 47.7 Plus
CG4988-PA 368 CG4988-PA 13..358 13..362 864 47.9 Plus
CG10996-PA 392 CG10996-PA 1..368 1..365 838 45.8 Plus