BO30146.complete Sequence
988 bp assembled on 2011-09-12
GenBank Submission: KX796781
> BO30146.complete
GAAGTTATCAGTCGACATGTTCGCCAACAAATTGTTGACCTGCTCGGCAT
TACTAATAATGTTATTTTTACTAAGCAGTACAGTGTTCTCTCAAAAGCTT
ATTGGCTTGCCGAGAGTCGGTAAAAATGTTAGTGATTTGTTTCTGGAACA
AGCAAACCCACTGACCAGCAGCTCCTCAACAATCTCAACGTCTTCGACAA
CAACTGAGAAACCTATCACAACCAGATCAACTTCTACAATAACTCCGAGA
TCTACCACACCTTCAACGGAATCACCATCGACCACCGCACCAGTGATAAG
CACGACCATTGCCCCGCAACCATATCCGCAACCATCCATTGGGGCTTGGA
ATACCTCTTGTATTATGCTTCAAATGGCGGCACAACTTAATTTTACCTAT
GAGGCTAGGGAGGGAAACTTTACCACCGGTCTGTACAACATCCCCAGCAA
CGCATCTGTTGAAGATGCAGAATGTAAAAGCCAGACTACTCAGTTTATTC
ATCTGATTTGGGGACCAGAAACATCAAAGCAATCATTAATTATGTATTTT
AATAAAAGTAATGACACCACTGTGCTTTCCTTTATGCAAATTCATCTGGC
TTTGCTGCCTGAGGATTTTCCAGATGCAAAGGAAAATCAAACGGTTCAGC
TTATTACCAGGAGCGACGGAGCGTTTAAGACACCAGAAAATATGTCGTAT
CACTGCACTCGTGTTCAGAAGATAAATATGACTGAGACACTCGATGCTGA
GCAGTTAATTGGTTGGATCAGCGTCAGTCATGTTCAGGTGGAGGCTTTCC
GGAGGGCCAACGACACTGGTTTCTCAGTTGGACACGATTGCGATAGCTCG
GAAACTTCGGATGTGGTTCCCATTGCCGTTGGAATTGCTTTAGCTGCATT
AATTTTGGTGGTATTAATATCATATCTGTGTGCTAGGCGTCGTTCCACCT
CCCGCGGTTACATGAGCTTCGCAAGCTTTCTAGACCAT
BO30146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lamp1-RA | 957 | CG3305-PA | 1..954 | 17..970 | 4770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lamp1-RA | 1583 | CG3305-RA | 107..1060 | 17..970 | 4770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21576242..21576580 | 632..970 | 1695 | 100 | Plus |
| 2L | 23513712 | 2L | 21574785..21575113 | 82..410 | 1645 | 100 | Plus |
| 2L | 23513712 | 2L | 21575964..21576186 | 410..632 | 1115 | 100 | Plus |
| 2L | 23513712 | 2L | 21573495..21573561 | 17..83 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:18:30 has no hits.
BO30146.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:46 Download gff for
BO30146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3305-RA | 123..1071 | 22..972 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:11:33 Download gff for
BO30146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lamp1-RA | 112..1060 | 22..972 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:58 Download gff for
BO30146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lamp1-RA | 112..1060 | 22..972 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:58 Download gff for
BO30146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21575965..21576186 | 411..632 | 100 | -> | Plus |
| 2L | 21573500..21573561 | 22..83 | 100 | -> | Plus |
| 2L | 21574787..21575113 | 84..410 | 100 | -> | Plus |
| 2L | 21576243..21576580 | 633..972 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:11:33 Download gff for
BO30146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21573500..21573561 | 22..83 | 100 | -> | Plus |
| arm_2L | 21574787..21575113 | 84..410 | 100 | -> | Plus |
| arm_2L | 21575965..21576186 | 411..632 | 100 | -> | Plus |
| arm_2L | 21576243..21576580 | 633..972 | 99 | | Plus |
BO30146.pep Sequence
Translation from 16 to 988
> BO30146.pep
MFANKLLTCSALLIMLFLLSSTVFSQKLIGLPRVGKNVSDLFLEQANPLT
SSSSTISTSSTTTEKPITTRSTSTITPRSTTPSTESPSTTAPVISTTIAP
QPYPQPSIGAWNTSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVED
AECKSQTTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFMQIHLALLPED
FPDAKENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGW
ISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVL
ISYLCARRRSTSRGYMSFASFLDH
BO30146.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lamp1-PA | 318 | CG3305-PA | 1..318 | 1..318 | 1616 | 100 | Plus |
