BO30160.complete Sequence
1246 bp assembled on 2011-09-12
GenBank Submission: KX798375
> BO30160.complete
GAAGTTATCAGTCGACATGTCAGCAGCTTTAGTACAGAAGGCGACGGAAA
CTCAACTCGATCAGACACCGGAAGTGGGTGTGGCACAGTTGGCAACTATA
TCGTTGCTACTGCAGTACGACATTGACAACACACTGAATGCGCTCAAGGA
GCACAAGAAGATGACGCTGGACGCTCGATTGGGCGGCGAGGTGGCCGCCG
CAGTCAACAACAACCAGGACAAGGACATAAACCGCAATCTGCCGGAGCAG
ACCGAACTGGAGGAGGATCTGCGACTCAAGAGCGGCGAGAACGGCTTCAT
GCCGCCCACTCCGCCGGCGACGCCCAACCTGCAGAGCACTGCCCAGAAGC
GCTGGAAGATCCTGGCCAAGGTGCTGCGCAAGGATTCCGAGGAGACGGTG
TCCTCGTCCAGCGATGAGTTCGCCGAGGAGCAAACTGCATCCGTGCGGCG
CTTCAAGAGCTTCGATCTGCTCCGCCAGGACAGCTTCGAGGATCACGTGA
GTCTGAAGTGCTTGGGCAAGACGGAGAACTGGTACAAATACCGCATGCAG
CTGGAGAACGAGTCGGAGTACTCGGTGAACATCCACCACATGGAGCGTCA
GCTGACCGCAAGTGATCTGATGGGCTTCAATAACACGGGCAACATATGCG
TTTGGCCCTCGGAGGAGGCTTTGACCGCGCTGGTCCTCTCGGAGGTGGCT
TCATATCGAGGCAAGTGGATCCTGGAACTCGGTGGCGGGTTCACCTCCCT
GGCTGGCCTCATGCTGGCCAAGTATGCCACTCCGTATGCCGTTCACCTGA
CCGATGGCAATGAGATATCGGTGGAGAACGTGAGGAAAACCGTTTGCCTC
AACGAGCTGAGCTGCTATACCAAGTGCTCGGTTCTGAAATGGCAGGAAAA
GTCTGCCCGATCGCAGGCAGAGCAGGCCAAGTTCGACTTCATCCTCTGCG
CCGACTGCCTGTTCTTCGACGAGGCCCGATCCGCCCTGGTGGACACCATC
TGGTACTATCTGGCGCCCGAGGGATCGGCCCTGATTATGGCTCCACGTCG
CGGGCGCACCTTGAGCGTTTTTCAGGACGAGTGCGTGGCCAGGGGCTTCC
GCGTGGAGTTGGCCACTCGCTATAACGAGACCATCTGGCAGCGGCATCTC
CAGCTGAAGGCGGACTCCGCCCTCTACGACGAGGACCTCCACTACCCGTT
GCTCCTGCGGCTGTGCAAGAGCCACAGCGCAAGCTTTCTAGACCAT
BO30160.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:34:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10947-RD | 1215 | CG10947-PD | 1..1212 | 17..1228 | 6060 | 100 | Plus |
| CG10947-RC | 1215 | CG10947-PC | 1..1212 | 17..1228 | 6060 | 100 | Plus |
| CG10947-RB | 1215 | CG10947-PB | 1..1212 | 17..1228 | 6060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:34:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10947-RD | 2767 | CG10947-RD | 529..1740 | 17..1228 | 6060 | 100 | Plus |
| CG10947-RC | 1727 | CG10947-RC | 253..1464 | 17..1228 | 6060 | 100 | Plus |
| CG10947-RB | 2605 | CG10947-RB | 367..1578 | 17..1228 | 6060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:34:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20386320..20387531 | 1228..17 | 6060 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:34:39 has no hits.
BO30160.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:50 Download gff for
BO30160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10947-RC | 251..1462 | 17..1230 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:06 Download gff for
BO30160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10947-RB | 367..1578 | 17..1230 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:41 Download gff for
BO30160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10947-RB | 367..1578 | 17..1230 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:41 Download gff for
BO30160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20386318..20387531 | 17..1230 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:06 Download gff for
BO30160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20386318..20387531 | 17..1230 | 99 | | Minus |
BO30160.pep Sequence
Translation from 16 to 1246
> BO30160.pep
MSAALVQKATETQLDQTPEVGVAQLATISLLLQYDIDNTLNALKEHKKMT
LDARLGGEVAAAVNNNQDKDINRNLPEQTELEEDLRLKSGENGFMPPTPP
ATPNLQSTAQKRWKILAKVLRKDSEETVSSSSDEFAEEQTASVRRFKSFD
LLRQDSFEDHVSLKCLGKTENWYKYRMQLENESEYSVNIHHMERQLTASD
LMGFNNTGNICVWPSEEALTALVLSEVASYRGKWILELGGGFTSLAGLML
AKYATPYAVHLTDGNEISVENVRKTVCLNELSCYTKCSVLKWQEKSARSQ
AEQAKFDFILCADCLFFDEARSALVDTIWYYLAPEGSALIMAPRRGRTLS
VFQDECVARGFRVELATRYNETIWQRHLQLKADSALYDEDLHYPLLLRLC
KSHSASFLDH
BO30160.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10947-PD | 404 | CG10947-PD | 1..404 | 1..404 | 2091 | 100 | Plus |
| CG10947-PC | 404 | CG10947-PC | 1..404 | 1..404 | 2091 | 100 | Plus |
| CG10947-PB | 404 | CG10947-PB | 1..404 | 1..404 | 2091 | 100 | Plus |
