BO30164.complete Sequence
3127 bp assembled on 2011-09-26
GenBank Submission: KX799988
> BO30164.complete
GAAGTTATCAGTCGACATGTATCTTACGTGCAGAAAATCGATTTTTGCCT
TAACAGCGGTTTTTGGTCGACGGTCAAGTGCGTTGAGGGCCAGCATTTCA
GTAACACATCGAACGATTGGCACGCTTATAAAACCCAAGATGACAATAGC
CGAAAGCTCGCAAAAGTCCGCAACTAGGAAGCCAGACAGCATGGAGCCCA
TATTGAGGCTGAACAACATTGAAAAGTCGCTGCAGGACACACGCGACTAC
CGCGGATTGCAACTAGAAAATGGACTAAAGGTCCTGCTCATCAGCGATCC
CAACACAGATGTCTCGGCGGCAGCGCTGTCCGTGCAAGTGGGCCACATGT
CTGATCCCACGAACCTGCCTGGATTGGCCCACTTTTGCGAGCACATGCTG
TTCCTCGGCACCGAGAAGTATCCGCATGAGAATGGCTACACCACATACCT
TTCGCAGAGCGGCGGAAGCAGCAACGCCGCCACCTATCCCCTGATGACCA
AGTACCACTTTCACGTGGCGCCGGACAAGTTAGATGGAGCCTTAGATCGC
TTCGCGCAGTTCTTCATAGCCCCCTTGTTCACGCCCAGTGCAACTGAGCG
GGAAATCAATGCGGTAAACTCTGAGCACGAGAAAAACCTGCCCAGCGATC
TGTGGCGCATCAAGCAGGTGAACCGCCACCTGGCAAAGCCTGACCATGCC
TACAGCAAGTTCGGCAGCGGCAACAAGACCACCCTATCCGAAATACCCAA
GTCCAAGAACATTGATGTGCGGGATGAGCTGCTAAAGTTTCACAAGCAGT
GGTACTCCGCCAACATAATGTGCCTGGCTGTCATTGGAAAAGAATCGCTG
GACGAACTGGAGGGCATGGTATTGGAGAAGTTCTCCGAAATAGAGAACAA
AAACGTCAAGGTTCCAGGTTGGCCACGCCACCCCTACGCCGAGGAGCGCT
ATGGACAAAAGGTGAAAATAGTGCCTATCAAAGACATCCGATCGCTGACG
ATAAGCTTTACCACAGACGATTTGACGCAGTTCTACAAGTCAGGCCCTGA
TAACTATTTGACCCACCTCATCGGTCACGAGGGCAAGGGCAGCATTTTAT
CCGAGCTGCGACGTCTGGGCTGGTGCAATGATCTTATGGCCGGGCATCAG
AACACGCAAAACGGCTTTGGATTCTTCGATATTGTCGTCGACCTGACGCA
GGAGGGTTTGGAGCACGTGGATGACATTGTCAAGATCGTGTTTCAGTACT
TGGAAATGCTCCGGAAAGAGGGACCCAAGAAGTGGATATTCGACGAGTGT
GTGAAACTCAACGAAATGAGATTCCGCTTCAAGGAAAAGGAGCAGCCGGA
GAATTTAGTCACACATGCCGTCTCGTCCATGCAAATATTTCCCCTGGAGG
AGGTGCTTATAGCTCCATATCTAAGCAACGAATGGCGTCCAGACCTCATT
AAAGGCCTATTGGATGAGCTGGTTCCCTCCAAGAGCCGAATCGTCATAGT
AAGCCAGAGTTTTGAACCGGATTGCGACCTAGCGGAGCCCTACTATAAAA
CAAAGTACGGCATTACGCGCGTGGCCAAAGATACTGTGCAATCCTGGGAG
AATTGTGAACTTAACGAGAACCTGAAACTGGCGCTGCCAAACAGCTTCAT
ACCAACAAACTTTGATATATCCGATGTACCAGCTGATGCTCCCAAACATC
CCACGATTATTTTGGACACCCCCATTTTGAGGGTGTGGCATAAGCAGGAC
AATCAGTTCAATAAGCCAAAGGCATGCATGACTTTCGACATGTCCAATCC
GATTGCTTATCTGGATCCCCTGAACTGCAATCTGAACCATATGATGGTGA
TGCTGCTGAAGGATCAGCTCAATGAGTACTTGTACGATGCGGAGCTAGCC
AGCTTAAAGCTCAGTGTGATGGGAAAGTCGTGCGGCATCGATTTCACCAT
TCGGGGCTTCAGTGACAAACAGGTGGTGCTGTTGGAGAAGCTGTTAGATC
ACCTTTTTGACTTCTCCATCGACGAGAAACGTTTTGACATCCTTAAGGAG
GAATACGTACGTTCACTGAAAAACTTTAAGGCTGAGCAACCATATCAGCA
TTCCATATACTATTTAGCTCTGTTGTTAACTGAAAATGCGTGGGCCAATA
TGGAGCTCTTGGACGCTATGGAACTTGTCACGTACGATAGAGTGTTGAAC
TTCGCTAAGGAGTTCTTCCAGCGCCTGCACACAGAGTGTTTTATTTTTGG
CAACGTGACCAAGCAGCAGGCCACGGACATCGCGGGGCGAGTTAACACCC
GCCTGGAGGCTACCAATGCGTCAAAGCTACCCATTTTGGCGCGGCAAATG
CTCAAGAAGCGAGAGTATAAGCTGCTCGCAGGCGACAGCTACTTATTTGA
GAAGGAGAATGAGTTCCACAAGAGCTCCTGCGCACAGCTCTACTTGCAGT
GCGGCGCACAAACAGATCACACAAACATAATGGTAAACCTGGTGTCTCAG
GTGCTCTCCGAACCTTGCTACGATTGCCTGCGCACAAAGGAACAACTGGG
TTACATCGTTTTCAGTGGCGTGCGTAAGGTGAATGGAGCTAATGGCATAC
GAATAATTGTGCAGTCAGCAAAGCACCCGTCCTATGTGGAAGATCGTATT
GAAAACTTTCTGCAAACTTATCTGCAAGTTATTGAGGACATGCCATTGGA
TGAGTTTGAGCGGCACAAGGAGGCTTTGGCCGTGAAGAAGCTGGAAAAAC
CTAAGACCATATTCCAGCAATTCAGCCAGTTCTATGGCGAAATAGCCATG
CAGACGTACCACTTTGAAAGAGAGGAGGCTGAGGTAGCAATACTCCGTAA
GATTAGCAAGGCCGACTTTGTAGACTACTTCAAGAAATTTATCGCAAAAG
ATGGCGAAGAGCGACGCGTTCTGTCCGTACACATTGTATCCCAGCAAACC
GATGAAAATGCCACGTCAGAAGCGGAGCCCGTGGAGATCACAAACATGGA
GCGCCACAAACCAATCAGCGATATTGTGACCTTTAAGTCGTGCAAGGAGC
TTTACCCCATTGCTCTGCCATTCCTTGACATTAAGGCGAAGGGAGCACGC
AGCAAGCTTGCAAGCTTTCTAGACCAT
BO30164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:00:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ide-RB | 2973 | CG5517-PB | 1..2970 | 140..3109 | 14850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ide-RB | 3439 | CG5517-RB | 224..3316 | 17..3109 | 15465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20373671..20374130 | 1591..1132 | 2300 | 100 | Minus |
| 3L | 28110227 | 3L | 20373263..20373613 | 1942..1592 | 1755 | 100 | Minus |
| 3L | 28110227 | 3L | 20372348..20372642 | 2674..2380 | 1475 | 100 | Minus |
| 3L | 28110227 | 3L | 20374896..20375170 | 616..342 | 1375 | 100 | Minus |
| 3L | 28110227 | 3L | 20372969..20373200 | 2174..1943 | 1160 | 100 | Minus |
| 3L | 28110227 | 3L | 20374615..20374844 | 842..613 | 1150 | 100 | Minus |
| 3L | 28110227 | 3L | 20371795..20372025 | 3109..2879 | 1140 | 99.6 | Minus |
| 3L | 28110227 | 3L | 20372080..20372290 | 2884..2674 | 1055 | 100 | Minus |
| 3L | 28110227 | 3L | 20372698..20372905 | 2382..2175 | 1040 | 100 | Minus |
| 3L | 28110227 | 3L | 20374362..20374566 | 1045..841 | 1025 | 100 | Minus |
| 3L | 28110227 | 3L | 20375227..20375363 | 342..206 | 685 | 100 | Minus |
| 3L | 28110227 | 3L | 20375419..20375555 | 208..72 | 685 | 100 | Minus |
| 3L | 28110227 | 3L | 20374187..20374272 | 1131..1046 | 430 | 100 | Minus |
| 3L | 28110227 | 3L | 20375616..20375673 | 74..17 | 290 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 10:00:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\mini-me | 4622 | Dpse\mini-me DPSEMINIME 4622bp | 2402..2470 | 910..978 | 120 | 63.8 | Plus |
BO30164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-26 10:53:02 Download gff for
BO30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ide-RB | 223..3315 | 17..3111 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:38 Download gff for
BO30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ide-RB | 224..3316 | 17..3111 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:10:37 Download gff for
BO30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ide-RB | 224..3316 | 17..3111 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:10:37 Download gff for
BO30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20371793..20372019 | 2885..3111 | 99 | <- | Minus |
| 3L | 20372080..20372289 | 2675..2884 | 100 | <- | Minus |
| 3L | 20375227..20375361 | 208..342 | 100 | <- | Minus |
| 3L | 20375420..20375554 | 73..207 | 100 | <- | Minus |
| 3L | 20375618..20375673 | 17..72 | 100 | | Minus |
| 3L | 20372348..20372640 | 2382..2674 | 100 | <- | Minus |
| 3L | 20372699..20372905 | 2175..2381 | 100 | <- | Minus |
| 3L | 20372969..20373200 | 1943..2174 | 100 | <- | Minus |
| 3L | 20373263..20373613 | 1592..1942 | 100 | <- | Minus |
| 3L | 20373671..20374130 | 1132..1591 | 100 | <- | Minus |
| 3L | 20374187..20374272 | 1046..1131 | 100 | <- | Minus |
| 3L | 20374362..20374564 | 843..1045 | 100 | <- | Minus |
| 3L | 20374615..20374843 | 614..842 | 100 | <- | Minus |
| 3L | 20374899..20375169 | 343..613 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:38 Download gff for
BO30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20367287..20367372 | 1046..1131 | 100 | <- | Minus |
| arm_3L | 20367462..20367664 | 843..1045 | 100 | <- | Minus |
| arm_3L | 20367715..20367943 | 614..842 | 100 | <- | Minus |
| arm_3L | 20367999..20368269 | 343..613 | 100 | <- | Minus |
| arm_3L | 20368327..20368461 | 208..342 | 100 | <- | Minus |
| arm_3L | 20368520..20368654 | 73..207 | 100 | <- | Minus |
| arm_3L | 20368718..20368773 | 17..72 | 100 | | Minus |
| arm_3L | 20364893..20365119 | 2885..3111 | 99 | <- | Minus |
| arm_3L | 20365180..20365389 | 2675..2884 | 100 | <- | Minus |
| arm_3L | 20365448..20365740 | 2382..2674 | 100 | <- | Minus |
| arm_3L | 20365799..20366005 | 2175..2381 | 100 | <- | Minus |
| arm_3L | 20366069..20366300 | 1943..2174 | 100 | <- | Minus |
| arm_3L | 20366363..20366713 | 1592..1942 | 100 | <- | Minus |
| arm_3L | 20366771..20367230 | 1132..1591 | 100 | <- | Minus |
BO30164.pep Sequence
Translation from 16 to 3127
> BO30164.pep
MYLTCRKSIFALTAVFGRRSSALRASISVTHRTIGTLIKPKMTIAESSQK
SATRKPDSMEPILRLNNIEKSLQDTRDYRGLQLENGLKVLLISDPNTDVS
AAALSVQVGHMSDPTNLPGLAHFCEHMLFLGTEKYPHENGYTTYLSQSGG
SSNAATYPLMTKYHFHVAPDKLDGALDRFAQFFIAPLFTPSATEREINAV
NSEHEKNLPSDLWRIKQVNRHLAKPDHAYSKFGSGNKTTLSEIPKSKNID
VRDELLKFHKQWYSANIMCLAVIGKESLDELEGMVLEKFSEIENKNVKVP
GWPRHPYAEERYGQKVKIVPIKDIRSLTISFTTDDLTQFYKSGPDNYLTH
LIGHEGKGSILSELRRLGWCNDLMAGHQNTQNGFGFFDIVVDLTQEGLEH
VDDIVKIVFQYLEMLRKEGPKKWIFDECVKLNEMRFRFKEKEQPENLVTH
AVSSMQIFPLEEVLIAPYLSNEWRPDLIKGLLDELVPSKSRIVIVSQSFE
PDCDLAEPYYKTKYGITRVAKDTVQSWENCELNENLKLALPNSFIPTNFD
ISDVPADAPKHPTIILDTPILRVWHKQDNQFNKPKACMTFDMSNPIAYLD
PLNCNLNHMMVMLLKDQLNEYLYDAELASLKLSVMGKSCGIDFTIRGFSD
KQVVLLEKLLDHLFDFSIDEKRFDILKEEYVRSLKNFKAEQPYQHSIYYL
ALLLTENAWANMELLDAMELVTYDRVLNFAKEFFQRLHTECFIFGNVTKQ
QATDIAGRVNTRLEATNASKLPILARQMLKKREYKLLAGDSYLFEKENEF
HKSSCAQLYLQCGAQTDHTNIMVNLVSQVLSEPCYDCLRTKEQLGYIVFS
GVRKVNGANGIRIIVQSAKHPSYVEDRIENFLQTYLQVIEDMPLDEFERH
KEALAVKKLEKPKTIFQQFSQFYGEIAMQTYHFEREEAEVAILRKISKAD
FVDYFKKFIAKDGEERRVLSVHIVSQQTDENATSEAEPVEITNMERHKPI
SDIVTFKSCKELYPIALPFLDIKAKGARSKLASFLDH
BO30164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ide-PB | 990 | CG5517-PB | 1..990 | 42..1031 | 5169 | 100 | Plus |
| CG2025-PA | 1147 | CG2025-PA | 54..1023 | 69..977 | 899 | 26.7 | Plus |
| CG10588-PB | 1058 | CG10588-PB | 41..987 | 69..986 | 882 | 26.7 | Plus |
| CG10588-PA | 1058 | CG10588-PA | 41..987 | 69..986 | 882 | 26.7 | Plus |
