BO30174.complete Sequence
790 bp assembled on 2011-09-12
GenBank Submission: KX795907
> BO30174.complete
GAAGTTATCAGTCGACATGCAGCGCGACGAAAAGCTTTTTGAGCTGACGC
TGGATACGGTCCTTCAGCGTCTGAACGACCTGAAGCTGGCGGTTCTCTCG
ATGATCCAAAAACTTGAGCTAGAGTACGAGACCATCAACTGGCCGACTTT
CCTGGACAACTTTGCCATTATCTCAAGTCACTTGACGGGATTGACGAAAA
TCTTGGCAAAGGAGCAGTGTCCGCCGCTAAGAAATCGAACGGTCCTGCCC
CTTCTGGTCTCCATGGACCGGGATGACACCCTCATCAACATCACAGAGGG
TCGGGTGCCAGTCTTTTCACACGACATTGTTCCAGACTATTTGAGAACTC
GGCCGGATCCGATTACGGAACAGAAAATGCTGCAGAACGAACAGAAGGCG
GCGAACCTCACCAACGACGCTGCCATGAAACAGGTCACTCAATACAACAA
GGTCGTCTCCCACGTCCTGGATATGGTCAGCAAAGCGCGCGAGGAGTGGG
AAATCGAGAGCTCTTCGCGCACCGGCATCCAGCAGACGAGTAGCATGGCC
GACACACAGCTCCTGGTGGCCGCCGTGGGTATGGGAAAAGGACTCAAGCT
GACCAACTATGGACCCGGACCTGGCATGATGGTACCGCCTTCAATTCGAG
CACCCTCGCCAATGGGTGGACCCGCTATGAGTCCCGGCAACGTGCAGCAG
CAGCTGGGAAAGGCGCCATCGGCTGTGAAAACAAACATCAAGTCCGCAAA
TCAAGTGCATCCGTTCTCTCGAGCAAGCTTTCTAGACCAT
BO30174.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED8-RA | 759 | CG13867-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED8-RA | 963 | CG13867-RA | 85..840 | 17..772 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20325967..20326722 | 772..17 | 3780 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:06:09 has no hits.
BO30174.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:32 Download gff for
BO30174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED8-RA | 85..840 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:14 Download gff for
BO30174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED8-RA | 85..840 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:00 Download gff for
BO30174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED8-RA | 85..840 | 17..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:00 Download gff for
BO30174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20325965..20326722 | 17..774 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:14 Download gff for
BO30174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16213470..16214227 | 17..774 | 99 | | Minus |
BO30174.pep Sequence
Translation from 16 to 790
> BO30174.pep
MQRDEKLFELTLDTVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFA
IISSHLTGLTKILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVF
SHDIVPDYLRTRPDPITEQKMLQNEQKAANLTNDAAMKQVTQYNKVVSHV
LDMVSKAREEWEIESSSRTGIQQTSSMADTQLLVAAVGMGKGLKLTNYGP
GPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTNIKSANQVHPF
SRASFLDH
BO30174.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED8-PA | 252 | CG13867-PA | 1..252 | 1..252 | 1283 | 100 | Plus |