Clone BO30177 Report

Search the DGRC for BO30177

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:301
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG14423-RA
Protein status:BO30177.pep: Imported from assembly
Sequenced Size:949

Clone Sequence Records

BO30177.complete Sequence

949 bp assembled on 2011-09-12

GenBank Submission: KX798658

> BO30177.complete
GAAGTTATCAGTCGACATGAAGTTGTACGCCATCGTTATCCTTTCGGCAT
GCTGTCTTCTAGCCGCACAAGCGGCACCCGAGAAGAAGATGGCCCTGAAG
TCGCGTCAAGTCGACCAGGATGCCAAGGTGGGCCAGGCCGCTTCCAGTGC
TGGTGCATCGACCTCTGCCAAGGATCCCTCCAGTGGCAGGCTGTTTCTCA
AAAAGTTCCTAACCTTCAAGAACCTGTTTAGCAGCAACAATCAACCCGTG
ATTCCGATCATTATCACCGGCGCCGGAACCGGGACTAGCACAGGAGCCTC
ACCCACTTCGCCCACGGTGACAGTGACCTCGACAGGCACCATTCCCTCGG
CCACTGGCACCATTACCACTTCGCCCACAACACCCACCTCGACGACATCG
AGCGCACGGCAAACGATTATCAAGGGTGCCCGATATGGCAGCAACGATGA
CGACCAGGAGCAGAATCAGGAACAGGATCAGGATCAGGACCAAGAACAGG
ACCAGGAGCTGGCCCAACCCGCACAGGCCTACCCCGCCGAGTTGATGGAC
GAGCAGGCTCTGCAGGCCGCCCTGGCCGCTGGCGCCCAGGAATACGAGGT
GGTCACCACTGAGCACGAGGTCCAGGGAACTGGCGGAGCCACCGTCGAAG
GCGGCAAGGCCACCCAAAGCAATAACCATATCAGTCTGCGACGCAAAGGC
GCCCGCCGCGGCCAGGTGATCAGCGTTCGCATCCCACCCCGCTACCGCCG
CTACTTCAAGAACGGCCAGAAGGTGATGCTCAATACCGGTAGTCGTCCCG
TCTCCAAGCGTCGCGTGGTTCGCAAGCGAGTGCCTGCCAAGAAAATCAAC
AAGAACAACCGGAGGCGCAACGGCAACAAGAAGAATCGTCGCAATCGCAA
CAAGAACCGTCGCAATCGCATCACCGCCGTCGCAAGCTTTCTAGACCAT

BO30177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-RA 918 CG14423-PA 1..915 17..931 4560 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:06:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-RA 1187 CG14423-RA 128..1044 15..931 4570 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2945530..2946446 15..931 4570 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 07:06:51 has no hits.

BO30177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:33 Download gff for BO30177.complete
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 130..1044 17..933 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:36 Download gff for BO30177.complete
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 130..1044 17..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:16 Download gff for BO30177.complete
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 130..1044 17..933 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:16 Download gff for BO30177.complete
Subject Subject Range Query Range Percent Splice Strand
X 2945532..2946446 17..933 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:36 Download gff for BO30177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2839565..2840479 17..933 99   Plus

BO30177.pep Sequence

Translation from 16 to 949

> BO30177.pep
MKLYAIVILSACCLLAAQAAPEKKMALKSRQVDQDAKVGQAASSAGASTS
AKDPSSGRLFLKKFLTFKNLFSSNNQPVIPIIITGAGTGTSTGASPTSPT
VTVTSTGTIPSATGTITTSPTTPTSTTSSARQTIIKGARYGSNDDDQEQN
QEQDQDQDQEQDQELAQPAQAYPAELMDEQALQAALAAGAQEYEVVTTEH
EVQGTGGATVEGGKATQSNNHISLRRKGARRGQVISVRIPPRYRRYFKNG
QKVMLNTGSRPVSKRRVVRKRVPAKKINKNNRRRNGNKKNRRNRNKNRRN
RITAVASFLDH

BO30177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-PA 305 CG14423-PA 1..305 1..305 1532 100 Plus
CG14422-PA 294 CG14422-PA 14..291 36..301 174 25.8 Plus