BO30178.complete Sequence
859 bp assembled on 2011-09-12
GenBank Submission: KX800027
> BO30178.complete
GAAGTTATCAGTCGACATGAGCCTGATTTGCCGTCGATTTGGCTCTTCCT
TGAGGCCCATCGCCCGCACACTCCACCCACTGCTCGCCAGCAAAATCATC
GAAGCACAAAGGTCACCGCTGAAAAACAAGCGATTTTACGCCGGCAAGAG
AATGGATTTAAAGTATCTAAATCAAAAGGAGGCCATCGCCGTGGACCAGG
AACTATTCAACGATTACAAGTTCAGTGTGGATCAGCTAATGGAGCTGGCG
GGCTTGAGCTGCGCCCATGCTGTGGCCAAATGCTTCCCGGCAGAGAAGCA
TCCACGAATTCTCGTTTGCTGTGGACCAGGAAACAATGGAGGCGACGGCT
TGGTTGCCGCCCGCCACCTCGCCCTCATGGGCTACACACCCACCATCTAC
TATCCCAAGCCGACGGCCAAGCCGCTCTTCGAGAACCTCAGCCACCAGTG
CCAACAGATGGACATCTGCGACGTGAAGGAGTGTCCGTCGGTGGAGAGTG
CCGCCCGTGACTATGATCTCATTCTGGATGCGCTCTTCGGATTCAGCTTC
AAGCCGCCGGTGCGAGCGGACTTTGTCGCCGTCGTGGAACTAATGCAGCA
GACCAAACTGCCAATTGCCAGCGTGGACATTCCCAGCGGCTGGGATGTGG
AGAAGGGCAAGCTGACTGAATGCGACGTGGAGCCGGCTCTGCTCATTTCC
CTCACTGCGCCGAAACTCTGTGCCCGCCAATTTCGCGGCGAACATCACTA
CTTGGGCGGCAGATTCGTGCCGCCCGCCCTGCAGCGCAAATACGAACTGA
ATCTGCCCGTTTATCCGGGCAACGAGCTGTGCGTCAAGCTGGCAAGCTTT
CTAGACCAT
BO30178.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:07:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2974-RB | 693 | CG2974-PB | 1..690 | 152..841 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:07:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2974-RB | 1200 | CG2974-RB | 107..931 | 17..841 | 4125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:07:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10085461..10086065 | 621..17 | 3025 | 100 | Minus |
X | 23542271 | X | 10085183..10085405 | 841..619 | 1115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:07:26 has no hits.
BO30178.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:34 Download gff for
BO30178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2974-RB | 107..931 | 17..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:57 Download gff for
BO30178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2974-RB | 107..931 | 17..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:32 Download gff for
BO30178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2974-RB | 107..931 | 17..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:32 Download gff for
BO30178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10085180..10085402 | 622..843 | 99 | <- | Minus |
X | 10085461..10086065 | 17..621 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:57 Download gff for
BO30178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9979213..9979435 | 622..843 | 99 | <- | Minus |
arm_X | 9979494..9980098 | 17..621 | 100 | | Minus |
BO30178.pep Sequence
Translation from 16 to 859
> BO30178.pep
MSLICRRFGSSLRPIARTLHPLLASKIIEAQRSPLKNKRFYAGKRMDLKY
LNQKEAIAVDQELFNDYKFSVDQLMELAGLSCAHAVAKCFPAEKHPRILV
CCGPGNNGGDGLVAARHLALMGYTPTIYYPKPTAKPLFENLSHQCQQMDI
CDVKECPSVESAARDYDLILDALFGFSFKPPVRADFVAVVELMQQTKLPI
ASVDIPSGWDVEKGKLTECDVEPALLISLTAPKLCARQFRGEHHYLGGRF
VPPALQRKYELNLPVYPGNELCVKLASFLDH
BO30178.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2974-PB | 230 | CG2974-PB | 1..230 | 46..275 | 1230 | 100 | Plus |