BO30189.complete Sequence
370 bp assembled on 2011-09-12
GenBank Submission: KX798269
> BO30189.complete
GAAGTTATCAGTCGACATGCGTATTTACCACCTGAATCTATTAGTGCTAA
GTGCCGGCCTACTGGTCCTGCTGGCCCAGTCGGGGACCACGGCCCCCCAG
GCGGATGAGGATGTACAGCAACTGACTCTGGCGGATGTAAATCAGGCGGA
GGAGCAGCAGGAGATGCCGGCTGTTCGCCTGGCCAGACAATTTGGATTCG
GCCGTGAAGGATTCGGCAGAGGACGCGGCGGATTCGGCGGATTTGGCGGA
AGGCGAGGCGGCGGTGGATTCCGGAGACCCGGTTTCGGTGGCGGTGGATT
CGGCGGATTCTACCCACCGCCACCGCCCTTCTTCGGCGGCCCCTTTTACG
GCGCAAGCTTTCTAGACCAT
BO30189.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9759-RB | 339 | CG9759-PB | 1..336 | 17..352 | 1680 | 100 | Plus |
CG9759-RC | 339 | CG9759-PC | 1..336 | 17..352 | 1680 | 100 | Plus |
CG9759-RA | 339 | CG9759-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:10:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9759-RB | 1122 | CG9759-RB | 49..384 | 17..352 | 1680 | 100 | Plus |
CG9759-RC | 1877 | CG9759-RC | 49..384 | 17..352 | 1680 | 100 | Plus |
CG9759-RA | 494 | CG9759-RA | 49..384 | 17..352 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13608863..13609198 | 352..17 | 1680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:10:23 has no hits.
BO30189.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:52:38 Download gff for
BO30189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9759-RA | 49..384 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:36 Download gff for
BO30189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9759-RA | 49..384 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:04:49 Download gff for
BO30189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9759-RA | 49..384 | 17..354 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:04:49 Download gff for
BO30189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13608861..13609198 | 17..354 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:36 Download gff for
BO30189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9434583..9434920 | 17..354 | 99 | | Minus |
BO30189.pep Sequence
Translation from 16 to 370
> BO30189.pep
MRIYHLNLLVLSAGLLVLLAQSGTTAPQADEDVQQLTLADVNQAEEQQEM
PAVRLARQFGFGREGFGRGRGGFGGFGGRRGGGGFRRPGFGGGGFGGFYP
PPPPFFGGPFYGASFLDH
BO30189.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9759-PB | 112 | CG9759-PB | 1..112 | 1..112 | 604 | 100 | Plus |
CG9759-PC | 112 | CG9759-PC | 1..112 | 1..112 | 604 | 100 | Plus |
CG9759-PA | 112 | CG9759-PA | 1..112 | 1..112 | 604 | 100 | Plus |
CG17738-PA | 110 | CG17738-PA | 8..104 | 14..115 | 139 | 41.7 | Plus |