BO30219.complete Sequence
1132 bp assembled on 2011-09-12
GenBank Submission: KX797824
> BO30219.complete
GAAGTTATCAGTCGACATGGCTTTGGTTTGCGTAGAGGACTTTGAAAAGA
AGGCCGTTGGGCAACTGGAGAAGAATGCCCTGGACTACTACCGTAGCGGA
GCCGGTGAGCAGTTCACCTTGGGACTGAATCGCGAGGCCTTCCGCCGGCT
ACGCTTGCGACCTCGTTGTTTGAGAGATGTCTCCCGCCTGGACATTAGTA
CCAAGATCTTCGGCGAGCAGATGCAGTGGCCTCTGGGCATTGCTCCGACG
GCTATGCAGAAGATGGCCCATCCGGACGGCGAGGTAGGCAATGCCAGGGC
GGCCGGAAAAGCCGGCTCCATCTTTATACTCAGCACACTGTCCACCACTT
CGCTGGAGGATTTGGCAGCCGGTGCCCCGGATACCATCAAATGGTTCCAA
CTGTACATCTACAAGGATCGTACCATAACGGAAAAGCTGGTACGTCGTGC
CGAGAAGGCGAACTTCAAAGCGCTCGTCCTGACCATCGATGCTCCAATCT
TTGGACACCGTAGAGCCGATGTGCGCAACAACTTCAGCTTGCCGTCGCAC
CTGTCATTGGCCAATTTCCAGGGCGTTAAGGCTACTGGAGTGGGTAATGC
CGCTATGGGCGCCTCAGGCATTAATGAGTACGTCTCCAGCCAGTTTGATC
CAACCATAACCTGGAAGGATATTGCCTGGTTGAAGGGCATCACTCATCTG
CCCATTGTGGTCAAGGGAGTGCTGACTGCCGAAGATGCTGTGTTGGCCCA
GGAGTTTGGATGCGCCGGACTCATTGTTTCCAACCACGGTGCTCGTCAGA
TCGATACGGTTCCGGCCTCGATCGAAGCCCTGCCGGAGATCGTAAAGGCC
GTGGGAGATAATCTGGTGGTTATGCTGGACGGAGGCATTATGCAGGGCAA
TGATATCTTCAAGGCTTTGGCTTTGGGAGCCAAGACGGTCTTTGTGGGTC
GTCCGGCTGTCTGGGGATTGGCCTACAATGGACAGAAAGGCGTGGAGGAG
ATGCTGAGTGTGCTGAGAAAGGACTTTGAGACCACCATGGCGCTGATCGG
TTGCCAAAATTTGGGAGACATCACGTCGGCAATGGTGGTACATGAGAGTC
AATATGCCAAGCTGGCAAGCTTTCTAGACCAT
BO30219.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18003-RB | 1101 | CG18003-PB | 1..1098 | 17..1114 | 5490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18003-RB | 1322 | CG18003-RB | 85..1183 | 16..1114 | 5495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:39:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10884103..10884797 | 420..1114 | 3475 | 100 | Plus |
2R | 25286936 | 2R | 10883631..10884035 | 16..420 | 2025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:39:04 has no hits.
BO30219.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:00 Download gff for
BO30219.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18003-RA | 3430..4527 | 17..1116 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:43 Download gff for
BO30219.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18003-RB | 86..1183 | 17..1116 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:50:44 Download gff for
BO30219.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18003-RB | 86..1183 | 17..1116 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:50:44 Download gff for
BO30219.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10883632..10884035 | 17..420 | 100 | -> | Plus |
2R | 10884104..10884797 | 421..1116 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:43 Download gff for
BO30219.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6771137..6771540 | 17..420 | 100 | -> | Plus |
arm_2R | 6771609..6772302 | 421..1116 | 99 | | Plus |
BO30219.pep Sequence
Translation from 16 to 1132
> BO30219.pep
MALVCVEDFEKKAVGQLEKNALDYYRSGAGEQFTLGLNREAFRRLRLRPR
CLRDVSRLDISTKIFGEQMQWPLGIAPTAMQKMAHPDGEVGNARAAGKAG
SIFILSTLSTTSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANF
KALVLTIDAPIFGHRRADVRNNFSLPSHLSLANFQGVKATGVGNAAMGAS
GINEYVSSQFDPTITWKDIAWLKGITHLPIVVKGVLTAEDAVLAQEFGCA
GLIVSNHGARQIDTVPASIEALPEIVKAVGDNLVVMLDGGIMQGNDIFKA
LALGAKTVFVGRPAVWGLAYNGQKGVEEMLSVLRKDFETTMALIGCQNLG
DITSAMVVHESQYAKLASFLDH
BO30219.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18003-PB | 366 | CG18003-PB | 1..366 | 1..366 | 1865 | 100 | Plus |