BO30222.complete Sequence
1351 bp assembled on 2012-03-06
GenBank Submission: KX795728
> BO30222.complete
GAAGTTATCAGTCGACATGTTTTACCCAAAAACACCATTTTTGGTGAACC
CGTTGCTGGAAGCCGATATCCTTAAAGTGAATTCTGCTGCACTTGCTCCG
CTGTTGGAATGGCTGTGCCTTACTCCCAAAGTCACCACTTACAGGGTGAA
CACTCTTAGGTGTTCCGTTGACGACTTTCGGAAAAAGTTAGAAGAAAAAC
TCGCCATTCGCTACGGTGTAAAATCTCCAAGGATTTACTGCTTGCCAAAC
CTACCCGAGATGTTGTGCATTGATCCGCTGGACTCACAGCTCACCAAAGC
TGTGGCCGACTCCGAGCTCAAGGAGGTAGTGGTTGACACTAACTGCGGAG
CTGCACTACTGCGAGGCGCCCACATATACGCCCCCGGTGTTTTAGCTATG
GAGTCAAACACTGAGCGGGAGGAACTCGTCAATGTCTACGCAGATCTGGA
TGGAAAATGCAAGCGCGGGACGGTCAAGCGGTACGAAAGCCCAAATAAGG
TTTTCCTGGGTACAGGCAAGGTGTTAATGCAGCGGTATCAGCTGTTCAAC
AACGCGGAGAAGCCCGCCTCTGGAGTGGCCGTGGAAATGCAGTCCAACGT
CAGCGGAGTGCCCACGCTGGGGGATCTAAGCAGCGAAGACGGCCTGTTGC
AAAACCTGCCTTCTATTGTTTGCGTCCGTGTCCTGGATCCGCAGCCCGGC
GAGCGCATACTGGACATGTGTGCCGCTCCGGGTAACAAAACAAGCCACAT
AGCCGAGTTGATGGGCGATCGGGGATCTGTGGTGGCCCTAGACAATTCGG
CCAGTCGCGTCCGCAGCATGCTGCCCAAATTGGGACACTACAAAAGCATA
ACGGCGCATGTTTTTAACTCCACCGAGGCAGTGGCAGCGGACGCTCCATC
TGCACCCGTGGGAGAATTCACTGGGCCTCCGTTTCCATGTGAAAGCTTTG
ACCGAATCTTGCTCGATGCACCCTGCAGTGGGCTGGGCAACCGGCCACAG
TTGTCCTGCAGCATTAAACAGGTTAAGGTCTTGTCCTCATATCCCCATAT
TCAGCGCCGGCTATTTGAACAGGCAGTGCAGCTCGTTCGTCCTGGCGGCA
TCCTTGTATATAGCACGTGCACCGTCACCGAGGATGAGTGCGAATGTCTT
GTGGCCTGGGCACTAAGAAAATTTGTCGAGCTGCGGCTAACAGATGCCAC
TCCCCGGTGGGGCGGTCCCGGACTTCCGCTTCCCGGTTTCGAGGCATGTA
AATCTCGTCTGTTGCAGCGCTTCGGTCCAAGCGGAGCAAATGCGGACACT
GTGGGCTTTTTTATTGCGAAGTTTCAGAAAATAGCAAGCTTTCTAGACCA
T
BO30222.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-RB | 1320 | CG11109-PB | 1..1317 | 17..1333 | 6585 | 100 | Plus |
| CG11109-RA | 1077 | CG11109-PA | 1..1074 | 260..1333 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-RB | 1415 | CG11109-RB | 82..1398 | 17..1333 | 6585 | 100 | Plus |
| CG11109-RA | 1445 | CG11109-RA | 178..1428 | 83..1333 | 6255 | 100 | Plus |
| CG11109-RA | 1445 | CG11109-RA | 24..89 | 17..82 | 330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22872435..22873685 | 83..1333 | 6255 | 100 | Plus |
| 3L | 28110227 | 3L | 22872281..22872346 | 17..82 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:24:28 has no hits.
BO30222.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-06 10:21:04 Download gff for
BO30222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 83..1392 | 24..1335 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:52 Download gff for
BO30222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 89..1398 | 24..1335 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:34 Download gff for
BO30222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 89..1398 | 24..1335 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:34 Download gff for
BO30222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22872288..22872346 | 24..82 | 100 | -> | Plus |
| 3L | 22872435..22873685 | 83..1335 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:52 Download gff for
BO30222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22865388..22865446 | 24..82 | 100 | -> | Plus |
| arm_3L | 22865535..22866785 | 83..1335 | 99 | | Plus |
BO30222.pep Sequence
Translation from 16 to 1351
> BO30222.pep
MFYPKTPFLVNPLLEADILKVNSAALAPLLEWLCLTPKVTTYRVNTLRCS
VDDFRKKLEEKLAIRYGVKSPRIYCLPNLPEMLCIDPLDSQLTKAVADSE
LKEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYADLDGKCKR
GTVKRYESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMQSNVSGVPT
LGDLSSEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMG
DRGSVVALDNSASRVRSMLPKLGHYKSITAHVFNSTEAVAADAPSAPVGE
FTGPPFPCESFDRILLDAPCSGLGNRPQLSCSIKQVKVLSSYPHIQRRLF
EQAVQLVRPGGILVYSTCTVTEDECECLVAWALRKFVELRLTDATPRWGG
PGLPLPGFEACKSRLLQRFGPSGANADTVGFFIAKFQKIASFLDH
BO30222.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:50:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-PB | 439 | CG11109-PB | 1..439 | 1..439 | 2286 | 100 | Plus |
| CG11109-PA | 358 | CG11109-PA | 1..358 | 82..439 | 1859 | 100 | Plus |
| CG8545-PA | 891 | CG8545-PA | 418..640 | 210..441 | 247 | 31.3 | Plus |
