BO30251.complete Sequence
946 bp assembled on 2011-09-12
GenBank Submission: KX796915
> BO30251.complete
GAAGTTATCAGTCGACATGGCAGGTGCAACAAATGCGGACATCAAGCGGG
TTCTATCCATCCAGAGCCATGTGGTCCACGGCTATGTGGGAAACAAGGTG
GCCACCTATCCACTGCAGCTGCTGGGTTTCGATGTGGATCCACTGAACTC
GGTCCAGTTCTCCAATCATACGGGCTACAAGACCTTTAAGGGTCCCGTCT
CCAATGAAAAGGAATTAGCCACCATTTTCGAGGGTCTGGAGGAGAACGAG
CTGCTGCCATTGTACTCACACCTCTTGACCGGCTACATTGGAAATCCATT
GTTCCTACGCCAGGTGGGCCACATTCTCAAGAAGCTGCGTCAGGCTAATC
CTGGCCTGGTGTACGTCTGTGATCCGGTTATGGGTGACAATGGTCAGCTC
TATGTGCCCAAGGAGCTCTTGCCCGTGTATCGGGACGAGATCATTCCACT
AGCGGACATCATCACTCCCAATCAATTCGAAGTGGAGCTGCTCACGGAAA
AGGAGGTACGCAGCGAGGCGGCTGTTTGGGAGGCAATGGAGTGGTTCCAT
CAGCGTGGCATCAAGACTGTGGTCATTTCCAGCAGTGATCTTGGCCAGCC
TGGCGTTCTGCGTGCTTTCCTTAGCCAGCAGAATGGTCCCCGCCTGGCCA
TTGATATTCCGAAGCAGGGTGGCAAGGATTTGGTCTTCACTGGCACCGGC
GATCTCTTCGCCTCCCTTTTCCTGGCCCACAGTCATGGCAGCAAGGATAT
AGCCAATGTTTTCGAGAAAACCATCGCCAGTTTGCAGGCGGTGATCAAGC
GAACTGTGGCTTCGCTGCCCAACGGTGGAAACGGCCCAGTCAAAGCAGCC
GAACGGGAACTAAAGCTGGTGCAGTCCAAGACGGAAATTGAACAGCCCCA
GGTGCTCCTCAAAGCGCAGCGACTTAACGCAAGCTTTCTAGACCAT
BO30251.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdxk-RC | 915 | CG34455-PC | 1..912 | 17..928 | 4560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdxk-RC | 1590 | CG34455-RC | 355..1266 | 17..928 | 4560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9361007..9361718 | 217..928 | 3560 | 100 | Plus |
| 3L | 28110227 | 3L | 9360670..9360771 | 17..118 | 510 | 100 | Plus |
| 3L | 28110227 | 3L | 9360841..9360942 | 117..218 | 510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:40:05 has no hits.
BO30251.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:02 Download gff for
BO30251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34455-RC | 359..1270 | 17..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:13 Download gff for
BO30251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34455-RC | 355..1266 | 17..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:15 Download gff for
BO30251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdxk-RC | 355..1266 | 17..930 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:15 Download gff for
BO30251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9360670..9360771 | 17..118 | 100 | -> | Plus |
| 3L | 9360843..9360942 | 119..218 | 100 | -> | Plus |
| 3L | 9361009..9361718 | 219..930 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:13 Download gff for
BO30251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9353770..9353871 | 17..118 | 100 | -> | Plus |
| arm_3L | 9353943..9354042 | 119..218 | 100 | -> | Plus |
| arm_3L | 9354109..9354818 | 219..930 | 99 | | Plus |
BO30251.pep Sequence
Translation from 16 to 946
> BO30251.pep
MAGATNADIKRVLSIQSHVVHGYVGNKVATYPLQLLGFDVDPLNSVQFSN
HTGYKTFKGPVSNEKELATIFEGLEENELLPLYSHLLTGYIGNPLFLRQV
GHILKKLRQANPGLVYVCDPVMGDNGQLYVPKELLPVYRDEIIPLADIIT
PNQFEVELLTEKEVRSEAAVWEAMEWFHQRGIKTVVISSSDLGQPGVLRA
FLSQQNGPRLAIDIPKQGGKDLVFTGTGDLFASLFLAHSHGSKDIANVFE
KTIASLQAVIKRTVASLPNGGNGPVKAAERELKLVQSKTEIEQPQVLLKA
QRLNASFLDH
BO30251.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdxk-PC | 304 | CG34455-PC | 1..304 | 1..304 | 1554 | 100 | Plus |
