BO30262.complete Sequence
1036 bp assembled on 2011-09-12
GenBank Submission: KX798333
> BO30262.complete
GAAGTTATCAGTCGACATGCGTGACTGGATGCCAGTGCTCTTCTGCGGAC
TGTCCGTGCCGATCTCGCTGTTCATGTGGCTGGGCAATGTGGCGCTGTCC
AAGTTCTGGAGCAGTGACTTTGAGGGTTATCCGACAGAGTCCCGGGTGAT
TCCGCCGGTGCGCTGGCTCTTCTCCACACTGGCGCCCTTGGCCCTGATGA
CTGTGGCTCTGCGCCGGAGGAGCGTCAACCGATCTGGAGCTGCGCTGGGC
ATTCTGGTGGCCTTCATTCTCTCCATCGCCAGCCATCCGTTCTTCGCCAG
CTTGGTGGTGTTCTTCTTCAGCTCATCGCGGGCCACCAAGTTCCGCGCGC
ACATGAAACGCCGTTTCGAGAGCGATTTTCGCGAGGGCGAAGGCCAACGA
AACTGGATACAGGTACTCTGCAACGGAGGCATGGCCGCCCAGCTTGCATT
GCTTTATCTGCTGGACTGCGGTAGTGGCGAGCGGGCGGTGGACTTCGCAC
GAGAATACCGATCCAGCTGGCTGGGTGTGGCCGTTATGAGTGCGTTTGCC
TGTTGCAATGGCGACACCTGGTCCAGTGAACTAGGATCCGTGCTGTCGCA
ACGCGATCCAGTTTCTATCATCACCTGGCGCAGAGTGCCGCGCGGTACCA
ATGGTGGGGTTTCGTTGCTCGGCGTCGCGGTGAGTCTGCTCGGCGGTCTG
CTCGTCGGCTTTGGCTATTTCGTCACCGTTCGTTACACGGTTGAGGCCAA
AATGCTTCTGATTAGCCCACCACAATGGCCAATCATCGCCTTCGGTGGCA
TCGCTGGACTTTTTGGGTCCCTTTTGGACTCTGTCCTAGGTGGTCTGCTG
CAGTTCTCGGGCATCAATGAGGAAGGCAAGATTGTGGATACACCTGGAAA
GGGAGTGCGCCACGTAAGCGGACTGCGCATCCTGGACAACCATAGTGTCA
ACCTGATTTCCAGCATCGTCACCGGCGTCACCATTCCTCTCCTGGCCCAG
AGATTCTGGCCCGTGCGCGCAAGCTTTCTAGACCAT
BO30262.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10171-RB | 1005 | CG10171-PB | 1..1002 | 17..1018 | 5010 | 100 | Plus |
| CG10171-RA | 993 | CG10171-PA | 1..990 | 17..1018 | 4795 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10171-RB | 1845 | CG10171-RB | 134..1135 | 17..1018 | 5010 | 100 | Plus |
| CG10171-RA | 1611 | CG10171-RA | 60..1049 | 17..1018 | 4795 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:39:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13386718..13387611 | 1018..125 | 4470 | 100 | Minus |
| 3L | 28110227 | 3L | 13387664..13387774 | 127..17 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:39:32 has no hits.
BO30262.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:01 Download gff for
BO30262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10171-RB | 96..1097 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:56 Download gff for
BO30262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10171-RB | 134..1135 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:50:59 Download gff for
BO30262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10171-RB | 134..1135 | 17..1020 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:50:59 Download gff for
BO30262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13386716..13387610 | 126..1020 | 99 | <- | Minus |
| 3L | 13387666..13387774 | 17..125 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:56 Download gff for
BO30262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13380766..13380874 | 17..125 | 100 | | Minus |
| arm_3L | 13379816..13380710 | 126..1020 | 99 | <- | Minus |
BO30262.pep Sequence
Translation from 16 to 1036
> BO30262.pep
MRDWMPVLFCGLSVPISLFMWLGNVALSKFWSSDFEGYPTESRVIPPVRW
LFSTLAPLALMTVALRRRSVNRSGAALGILVAFILSIASHPFFASLVVFF
FSSSRATKFRAHMKRRFESDFREGEGQRNWIQVLCNGGMAAQLALLYLLD
CGSGERAVDFAREYRSSWLGVAVMSAFACCNGDTWSSELGSVLSQRDPVS
IITWRRVPRGTNGGVSLLGVAVSLLGGLLVGFGYFVTVRYTVEAKMLLIS
PPQWPIIAFGGIAGLFGSLLDSVLGGLLQFSGINEEGKIVDTPGKGVRHV
SGLRILDNHSVNLISSIVTGVTIPLLAQRFWPVRASFLDH
BO30262.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10171-PB | 334 | CG10171-PB | 1..334 | 1..334 | 1726 | 100 | Plus |
| CG10171-PA | 330 | CG10171-PA | 1..330 | 1..334 | 1686 | 98.8 | Plus |
