BO30265.complete Sequence
673 bp assembled on 2011-09-12
GenBank Submission: KX796888
> BO30265.complete
GAAGTTATCAGTCGACATGTCAGCAAAGGCAGCCTTACCACTGCAGATGT
TTGGCCGGCGACTCGTCCACCTGAGGTCATCGGTCACTTCTCAAAATATG
AGTGCCCTGCGTTTGTACAGCACAGAGAAACAGCCGGAAGAAGCGACAGA
GCAGAAGGCCACCGAATCGTCGCCAGAAGTTGAGAAACTCACCAAGGAAC
TGGCCGCCGCCAAGGAGCAGAATGCCGAGCTAATGGACAAATACAAGCGT
TCGCTAGCCGACAGCGAAAACATGAGGAACCGACTGAACAAACAGATCAG
CGACGCCAAGATCTTTGGCATCCAGAGCTTCTGCAAGGATCTGCTCGAGG
TGGCGGACACACTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGCTC
AGCGGCAATGCTGATTTGAAGAACCTGTACGAGGGCCTCACCATGACGCG
CGCCTCGCTGCTGCAGGTGTTCAAGCGACACGGACTGGAGCCACTGGATC
CCATCAACCAGAAGTTCGACCCCAATCAGCACGAGGCGCTGTTCCAGAAG
GAGGACAAGACCGTCGAGCCCAACACCGTGGTGGAGGTGACCAAGCTGGG
CTACAAACTGCACGAGCGTTGCATACGTCCGGCCTTGGTGGGCGTGTCGA
AGTGTGCAAGCTTTCTAGACCAT
BO30265.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Roe1-RA | 642 | CG6155-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Roe1-RA | 1065 | CG6155-RA | 105..743 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13554385..13554681 | 101..397 | 1485 | 100 | Plus |
| 2R | 25286936 | 2R | 13555025..13555284 | 396..655 | 1300 | 100 | Plus |
| 2R | 25286936 | 2R | 13554181..13554266 | 17..102 | 430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:39:49 has no hits.
BO30265.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:02 Download gff for
BO30265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Roe1-RA | 100..738 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:05 Download gff for
BO30265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Roe1-RA | 105..743 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:06 Download gff for
BO30265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Roe1-RA | 105..743 | 17..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:06 Download gff for
BO30265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13554181..13554266 | 17..102 | 100 | -> | Plus |
| 2R | 13554387..13554681 | 103..397 | 100 | -> | Plus |
| 2R | 13555027..13555284 | 398..657 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:05 Download gff for
BO30265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9441686..9441771 | 17..102 | 100 | -> | Plus |
| arm_2R | 9441892..9442186 | 103..397 | 100 | -> | Plus |
| arm_2R | 9442532..9442789 | 398..657 | 99 | | Plus |
BO30265.pep Sequence
Translation from 16 to 673
> BO30265.pep
MSAKAALPLQMFGRRLVHLRSSVTSQNMSALRLYSTEKQPEEATEQKATE
SSPEVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIF
GIQSFCKDLLEVADTLGHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQ
VFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHE
RCIRPALVGVSKCASFLDH
BO30265.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Roe1-PA | 213 | CG6155-PA | 1..213 | 1..213 | 1075 | 100 | Plus |
