Clone BO30286 Report

Search the DGRC for BO30286

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:302
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG5281-RA
Protein status:BO30286.pep: Imported from assembly
Sequenced Size:1075

Clone Sequence Records

BO30286.complete Sequence

1075 bp assembled on 2011-09-12

GenBank Submission: KX794702

> BO30286.complete
GAAGTTATCAGTCGACATGCCGGAAAACCTCGAGCTTCAGCAGTTCCAGG
AGGGCGCCCCGCCCCCAGATCCCGCCCCCCGTTGGCTGGAGCGCTTGCAG
CGACGATTGGGCGCCGATTGTCCCTACTTGGGTATCCTGCTGGCCACGCT
CTCCTCGCTCTTCTTCTCCCTGTGCTCGGTGATTGTGAAGGGACTGGTGG
ACGTGAACCCCATGGAGCTGGCCTCGTTTCGATTCGTCGGAGTCCTGTTG
CCGGCACTGCCCATCCTGATATACACGCGACAGCCGGTGTTTCCGGAGGG
CAAGAGGGTGATACTGCTGCTGCGCTGCTTCATGGGCACAACGGGTCTGA
TGCTCAGCTTCTATGCCTTCCGACACATGCCCCTGGCCGATGCGAGTGTC
ATCATCTTCTCCACGCCCGTTTTCGTGGCCATATTTGCGCGTGCCTTCCT
CAAGGAGCCGTGTACGCTGTTCAATGTCCTGACCATCAATATGACATTGC
TCGGCGTGGTCCTCATCACGCGCCCACCCTTTGTGTTCGGTGACACGGCG
GAGAGTGAGGATGTCGCTGGGAAGACGTACGACATCTGGGGACCAGTGGC
CGCCATATCATCCACACTCTTCGGAGCCAATGTGTACATCCTGCTGCGGG
CGCTCAAAAACCTGCACTTCTCCGTCATCATGACGAATTTCGGTACCATC
GCTCTGGTCTACACACTGATCGTTTGCGCATCTATTGGAGCTGTGTGCTG
GCCAAGCTGCGGACGGGATCGTTGGCTGGTCGTTGTACTGGGCGTATTCA
GCTTCCTGGGCCAGATCCTGCTCACGCTATCGCTGCAGATCGAACAGGCC
GGACCAGTGGCCATTGCTCGCTGCGCCGACATCGTCTTCGCCTTCGTCTG
GCAGATGCTCTTCTTCGGAGAGACGCCCACCGCTTACTCGCTGGTGGGTG
CGGTGATGGTGATGGGATCTGTGGTTCTGACGGCCCTGAAGAAATGGGCA
GGCACCCTGCCACGCGAGTCGTCGCTGCGGAAGCGATTCAGGCTCATCCT
GCTGGAAGCAAGCTTTCTAGACCAT

BO30286.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5281-RA 1044 CG5281-PA 1..1041 17..1057 5205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG5281-RA 1613 CG5281-RA 270..1310 17..1057 5205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11436180..11437220 17..1057 5205 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:10:53 has no hits.

BO30286.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 18:11:35 Download gff for BO30286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5281-RA 270..1310 17..1059 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:53 Download gff for BO30286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5281-RA 270..1310 17..1059 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:02 Download gff for BO30286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5281-RA 270..1310 17..1059 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:02 Download gff for BO30286.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11436180..11437220 17..1059 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:53 Download gff for BO30286.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7261902..7262942 17..1059 99   Plus

BO30286.pep Sequence

Translation from 16 to 1075

> BO30286.pep
MPENLELQQFQEGAPPPDPAPRWLERLQRRLGADCPYLGILLATLSSLFF
SLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVIL
LLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT
LFNVLTINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISST
LFGANVYILLRALKNLHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGR
DRWLVVVLGVFSFLGQILLTLSLQIEQAGPVAIARCADIVFAFVWQMLFF
GETPTAYSLVGAVMVMGSVVLTALKKWAGTLPRESSLRKRFRLILLEASF
LDH

BO30286.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5281-PA 347 CG5281-PA 1..347 1..347 1774 100 Plus