Clone BO30302 Report

Search the DGRC for BO30302

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:303
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG42808-RA
Protein status:BO30302.pep: Imported from assembly
Sequenced Size:439

Clone Sequence Records

BO30302.complete Sequence

439 bp assembled on 2011-09-22

GenBank Submission: KX797305

> BO30302.complete
GAAGTTATCAGTCGACATGCCGCTGCGCAAGAAAGAGGACTACATACCCA
TTAAGTGCGAGGGCTGGAACGGCAAGTTCGTGTATCCGGATGGAGCTGTC
AATAATGTGTCCAAGATACGTCGCCAGAACCAGAACGTAACCAATACCAA
CAACTTCTACGGATTCAACACGGAACCCATTGTCCTGCCCACCGAATGGG
ATGGCACCTTCGTGAAGAGTGGCGAGACCCGCATCAAACAGGAGCGCAAT
CGATCCGATGACCAGGACTACTTTGATTACAACACCGAGCCCACGGTACT
GCCCACCACTTGGAGTGGCGAGTTCGTCAACGATCCCAACGATGTGCGCA
TTAAGCCGGAACGCAACTTCTCGGATGCCAGGGATTATGCAGAGGCATCC
CGATTCAAACTGGTCCAGCACGCAAGCTTTCTAGACCAT

BO30302.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG42808-RA 408 CG42808-PA 1..405 17..421 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG42808-RA 640 CG13335-RA 76..480 17..421 2025 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13573778..13574182 421..17 2025 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:03:24 has no hits.

BO30302.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:40 Download gff for BO30302.complete
Subject Subject Range Query Range Percent Splice Strand
CG42808-RA 61..465 17..423 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:11 Download gff for BO30302.complete
Subject Subject Range Query Range Percent Splice Strand
CG42808-RA 76..480 17..423 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:10:07 Download gff for BO30302.complete
Subject Subject Range Query Range Percent Splice Strand
CG42808-RA 76..480 17..423 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:10:07 Download gff for BO30302.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13573775..13574182 17..423 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:11 Download gff for BO30302.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9461280..9461687 17..423 99   Minus

BO30302.pep Sequence

Translation from 16 to 439

> BO30302.pep
MPLRKKEDYIPIKCEGWNGKFVYPDGAVNNVSKIRRQNQNVTNTNNFYGF
NTEPIVLPTEWDGTFVKSGETRIKQERNRSDDQDYFDYNTEPTVLPTTWS
GEFVNDPNDVRIKPERNFSDARDYAEASRFKLVQHASFLDH

BO30302.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG42808-PA 135 CG13335-PA 1..135 1..135 740 100 Plus