BO30312.complete Sequence
406 bp assembled on 2011-09-22
GenBank Submission: KX794036
> BO30312.complete
GAAGTTATCAGTCGACATGTGCATGCAAGTTCCACGGTTTGGATGTCGAG
TTCCAGTTTCCAGTTCCCGTTGTAAGACCGGTGCAACCAGATCTTGTCGA
AAGCCCGGATCTCGCTACAGAACCTTCTGCACTCCACCACCTCGCTGTAG
TCCCAGATCCTGCTGCACATCCGAATCCTGCTGCAAATCCGGGTCCTGCT
GCGGACCATGTGGGTCATGCTCGAATGGCTGTGCCGCCTGCTTATCCTCC
TGCTGTGGGATATTCCCCGAAACCTGCTGTGGTCCGTGGTGTGAGTCCTG
TCTGGATCCTTCCTGGTTCTCATGGCTGGCTCCCGATCTCGGGCGATCCT
GCTGTTGTGCTTGCATGACCTGTTGTCGATCCAAGTGCGCAAGCTTTCTA
GACCAT
BO30312.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-RA | 375 | CG42758-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-RA | 631 | CG42758-RA | 180..552 | 16..388 | 1865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14567682..14568054 | 16..388 | 1865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:01:54 has no hits.
BO30312.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:38 Download gff for
BO30312.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 181..552 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:59 Download gff for
BO30312.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 181..552 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:09:38 Download gff for
BO30312.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 181..552 | 17..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:09:38 Download gff for
BO30312.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14567683..14568054 | 17..390 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:59 Download gff for
BO30312.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14560783..14561154 | 17..390 | 99 | | Plus |
BO30312.pep Sequence
Translation from 16 to 406
> BO30312.pep
MCMQVPRFGCRVPVSSSRCKTGATRSCRKPGSRYRTFCTPPPRCSPRSCC
TSESCCKSGSCCGPCGSCSNGCAACLSSCCGIFPETCCGPWCESCLDPSW
FSWLAPDLGRSCCCACMTCCRSKCASFLDH
BO30312.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-PA | 124 | CG42758-PA | 1..124 | 1..124 | 764 | 100 | Plus |
Pif2-PA | 118 | CG31483-PA | 2..69 | 44..124 | 160 | 42 | Plus |
Pif2-PA | 118 | CG31483-PA | 18..117 | 38..124 | 137 | 35 | Plus |