BO30314.complete Sequence
583 bp assembled on 2011-09-22
GenBank Submission: KX799119
> BO30314.complete
GAAGTTATCAGTCGACATGAGTTCAATGCAAATACCCAAAGCTGTGTACA
TCCTGGTGACGCTGATTGTCTGCCCACCTGCGAGGCTTTCAATTTCAGCA
CCTTCAGTTACCAGAGAACCTGTACGAGATCGCTGTGATTTCCCCCAAAA
TGTCGATTGCGTGGAGTCCGAGTGCTCCATCTACTCCAATGCGTATCATT
TGCGCTATGTTCCCAGCAAGGTTTCCTGCCAGAAGTACTTCATCTGCGGC
AACGGAATTCCCAGGGAGCAAACCTGCACTGCTGGCCTCCACTTTAGTAC
CAAATGCGATTGCTGCGATATTCCATCTAAGTCGGACTGTCAGATCCCAG
CAGTGGAAAGAAAAGTGCAGCAACTTTCACGACTTTCACCCGTTACTACT
GTAGGAATCTGCCCCCCATCCGGGGTCCATTTCTATGTCCATGAGTCTCG
ACGAGATGCCTATTACTATTGCGTGGATGGACATGGTCTGGTTCTGGATT
GTTCGGCGGGTCTTTGGTACGACCCCACGGTTCAGGAGTGTCGTGAACCC
CAGAATGTGGGCATGGCAAGCTTTCTAGACCAT
BO30314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10140-RA | 894 | CG10140-PA | 453..891 | 127..565 | 2195 | 100 | Plus |
CG10140-RA | 894 | CG10140-PA | 269..380 | 17..128 | 560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:06:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10140-RA | 969 | CG10140-RA | 488..926 | 127..565 | 2195 | 100 | Plus |
CG10140-RA | 969 | CG10140-RA | 304..415 | 17..128 | 560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13439360..13439583 | 565..342 | 1120 | 100 | Minus |
3L | 28110227 | 3L | 13439644..13439860 | 343..127 | 1085 | 100 | Minus |
3L | 28110227 | 3L | 13439933..13440044 | 128..17 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:06:09 has no hits.
BO30314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:43 Download gff for
BO30314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10140-RB | 318..866 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:33 Download gff for
BO30314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10140-RB | 318..866 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:11:00 Download gff for
BO30314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10140-RA | 304..415 | 17..128 | 100 | -> | Plus |
CG10140-RA | 490..926 | 129..567 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:11:00 Download gff for
BO30314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13439358..13439581 | 344..567 | 99 | <- | Minus |
3L | 13439644..13439858 | 129..343 | 100 | <- | Minus |
3L | 13439933..13440044 | 17..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:33 Download gff for
BO30314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13432458..13432681 | 344..567 | 99 | <- | Minus |
arm_3L | 13432744..13432958 | 129..343 | 100 | <- | Minus |
arm_3L | 13433033..13433144 | 17..128 | 100 | | Minus |
BO30314.pep Sequence
Translation from 16 to 583
> BO30314.pep
MSSMQIPKAVYILVTLIVCPPARLSISAPSVTREPVRDRCDFPQNVDCVE
SECSIYSNAYHLRYVPSKVSCQKYFICGNGIPREQTCTAGLHFSTKCDCC
DIPSKSDCQIPAVERKVQQLSRLSPVTTVGICPPSGVHFYVHESRRDAYY
YCVDGHGLVLDCSAGLWYDPTVQECREPQNVGMASFLDH
BO30314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10140-PA | 297 | CG10140-PA | 152..297 | 38..183 | 827 | 100 | Plus |
CG10154-PB | 316 | CG10154-PB | 171..316 | 38..183 | 414 | 49.7 | Plus |
CG10154-PA | 316 | CG10154-PA | 171..316 | 38..183 | 414 | 49.7 | Plus |
CG10725-PB | 269 | CG10725-PB | 124..268 | 38..182 | 393 | 44.8 | Plus |
CG33986-PB | 277 | CG33986-PB | 141..259 | 64..176 | 168 | 31.1 | Plus |
CG10725-PB | 269 | CG10725-PB | 96..192 | 70..181 | 159 | 31.2 | Plus |