Clone BO30327 Report

Search the DGRC for BO30327

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:303
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG42635-RA
Protein status:BO30327.pep: Imported from assembly
Sequenced Size:430

Clone Sequence Records

BO30327.complete Sequence

430 bp assembled on 2011-09-22

GenBank Submission: KX793972

> BO30327.complete
GAAGTTATCAGTCGACATGGAAATGGTTCACACGGCCATCGGAGTTGCGG
GCATAGTGGCCCTGTTTATGGTAGTTTCCCGTTCGTTAACTGAAGTGGGT
GGCAGGGTGTTAAACCAAACCCGTGATCCGATCGCTGACCTTGTGAGGCG
CGGTGGTCCAGTGGCGGATCAGCTGTCCGCCGTCGAGGGCGAAACTCCTC
TAGTAGAGGGCGATCGCATGGATGGCGCCTGCTCCGTGGTACAAAGTATT
GGAGGCAAGGCATGTGCCTTTGTAGGACCATTGCTTCCTAAGTTTGGCAG
TGAACATAATTCCGAGGGCTCCTCCAAGGAAGACGAAAAGGATAAAAAGG
ACTCGGAACCGGTAGTAGTAAAACCTGAAACACCGCCAGCGGCAGAATTA
ACCGAAGAGGAGGCAAGCTTTCTAGACCAT

BO30327.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG42635-RA 399 CG42635-PA 1..396 17..412 1980 100 Plus
CG42635-RB 399 CG42635-PB 1..396 17..412 1980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG42635-RA 1028 CG42635-RA 494..889 17..412 1980 100 Plus
CG42635-RB 637 CG42635-RB 103..498 17..412 1980 100 Plus
CG42634-RA 1028 CG42634-RA 494..889 17..412 1980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18008428..18008823 17..412 1980 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:55:53 has no hits.

BO30327.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:12 Download gff for BO30327.complete
Subject Subject Range Query Range Percent Splice Strand
CG42635-RA 494..889 17..414 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:55 Download gff for BO30327.complete
Subject Subject Range Query Range Percent Splice Strand
CG42635-RA 494..889 17..414 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:04 Download gff for BO30327.complete
Subject Subject Range Query Range Percent Splice Strand
CG42634-RA 494..889 17..414 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:04 Download gff for BO30327.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18008428..18008823 17..414 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:55 Download gff for BO30327.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18008428..18008823 17..414 99   Plus

BO30327.pep Sequence

Translation from 16 to 430

> BO30327.pep
MEMVHTAIGVAGIVALFMVVSRSLTEVGGRVLNQTRDPIADLVRRGGPVA
DQLSAVEGETPLVEGDRMDGACSVVQSIGGKACAFVGPLLPKFGSEHNSE
GSSKEDEKDKKDSEPVVVKPETPPAAELTEEEASFLDH

BO30327.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG42635-PA 132 CG42635-PA 1..132 1..132 668 100 Plus
CG42635-PB 132 CG42635-PB 1..132 1..132 668 100 Plus