Clone BO30329 Report

Search the DGRC for BO30329

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:303
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG18271-RB
Protein status:BO30329.pep: Imported from assembly
Sequenced Size:925

Clone Sequence Records

BO30329.complete Sequence

925 bp assembled on 2011-09-22

GenBank Submission: KX794390

> BO30329.complete
GAAGTTATCAGTCGACATGAACTCCTACGACCCACAGGACACAGCTTCTC
AACAGGAGGAATCCGTCGCGCTGAAGGGCCACTTCTACGGCGTCTATTTG
CTATGCAGTCAGAGCTTGGATCCTCGCTACCGGGGAAAATGCTACGTGGG
CTTCACCGTGAACCCCAAACGGCGGATACGCCAACACAATCTTGGTTGTG
ATTTCGGTGGCGCGAGGAAAACCAGTCGCAAAGGGCCGTGGCTGATGGTA
ATGATCGTGCACGGATTCCCGAATAATACAGTGGCACTCCAGTTTGAATG
GGCTTGGCAACAGCCGTCGCTTTCAACTAGGCTTAAAATGTACCCTGAAT
TAAAACGAAAACTGCCCAGGGAGACGTTCTTTGACTACAACTTTAGGATC
CTTAGTAATATGCTGGGGGTTGGCCCTTGGAATAGATTACCGCTCACCGT
TCGCTGGCTAGAAACGGATTACGAGAGGCCATTCAGCAAGGCACTGCCTA
AACACATGGAAATTGTGAGTGGCAAGGTTTCCATTAGTGCCTCACAACGT
AGGAGACCTGATGATGCAGTACCTCCTCCACCTGTGGCGTGGGCTTCCGA
GTGCCACCTTTGTATGCAGGAAATGGAGCAACCGGAGAAATCCCGCCTGG
GATGCACAAATCAAATGTGTCGGCTGACATGCCATATGGTGTGCCTGGCC
AATTACCTTCTGGGCGACGAGCCAGGTCATTACATCCCAGTTGGAGGAGA
GTGTCCGCTTTGTGAGACTCGTCTCAGCTGGGCAGCACTGCTGCAGCGCA
AACGTCTTCTTTTGGGCGTGCCTGAAGAACTGCAGGATCATGACGAGGAT
CTGAGCGACGACATTGATGTAGACAGCGATATTGAAGATACCCCGGAGCT
CAGCGATGCAAGCTTTCTAGACCAT

BO30329.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
slx1-RB 894 CG18271-PB 1..891 17..907 4455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
slx1-RB 1139 CG18271-RB 34..924 17..907 4455 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4643543..4644421 29..907 4395 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:56:23 has no hits.

BO30329.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:14 Download gff for BO30329.complete
Subject Subject Range Query Range Percent Splice Strand
CG18271-RB 23..913 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:08 Download gff for BO30329.complete
Subject Subject Range Query Range Percent Splice Strand
slx1-RB 34..924 17..909 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:21 Download gff for BO30329.complete
Subject Subject Range Query Range Percent Splice Strand
slx1-RB 34..924 17..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:21 Download gff for BO30329.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4643544..4644421 30..909 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:08 Download gff for BO30329.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 469266..470143 30..909 99   Plus

BO30329.pep Sequence

Translation from 16 to 925

> BO30329.pep
MNSYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNP
KRRIRQHNLGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP
SLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLPLTVRWLET
DYERPFSKALPKHMEIVSGKVSISASQRRRPDDAVPPPPVAWASECHLCM
QEMEQPEKSRLGCTNQMCRLTCHMVCLANYLLGDEPGHYIPVGGECPLCE
TRLSWAALLQRKRLLLGVPEELQDHDEDLSDDIDVDSDIEDTPELSDASF
LDH

BO30329.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
slx1-PB 297 CG18271-PB 1..297 1..297 1626 100 Plus