BO30329.complete Sequence
925 bp assembled on 2011-09-22
GenBank Submission: KX794390
> BO30329.complete
GAAGTTATCAGTCGACATGAACTCCTACGACCCACAGGACACAGCTTCTC
AACAGGAGGAATCCGTCGCGCTGAAGGGCCACTTCTACGGCGTCTATTTG
CTATGCAGTCAGAGCTTGGATCCTCGCTACCGGGGAAAATGCTACGTGGG
CTTCACCGTGAACCCCAAACGGCGGATACGCCAACACAATCTTGGTTGTG
ATTTCGGTGGCGCGAGGAAAACCAGTCGCAAAGGGCCGTGGCTGATGGTA
ATGATCGTGCACGGATTCCCGAATAATACAGTGGCACTCCAGTTTGAATG
GGCTTGGCAACAGCCGTCGCTTTCAACTAGGCTTAAAATGTACCCTGAAT
TAAAACGAAAACTGCCCAGGGAGACGTTCTTTGACTACAACTTTAGGATC
CTTAGTAATATGCTGGGGGTTGGCCCTTGGAATAGATTACCGCTCACCGT
TCGCTGGCTAGAAACGGATTACGAGAGGCCATTCAGCAAGGCACTGCCTA
AACACATGGAAATTGTGAGTGGCAAGGTTTCCATTAGTGCCTCACAACGT
AGGAGACCTGATGATGCAGTACCTCCTCCACCTGTGGCGTGGGCTTCCGA
GTGCCACCTTTGTATGCAGGAAATGGAGCAACCGGAGAAATCCCGCCTGG
GATGCACAAATCAAATGTGTCGGCTGACATGCCATATGGTGTGCCTGGCC
AATTACCTTCTGGGCGACGAGCCAGGTCATTACATCCCAGTTGGAGGAGA
GTGTCCGCTTTGTGAGACTCGTCTCAGCTGGGCAGCACTGCTGCAGCGCA
AACGTCTTCTTTTGGGCGTGCCTGAAGAACTGCAGGATCATGACGAGGAT
CTGAGCGACGACATTGATGTAGACAGCGATATTGAAGATACCCCGGAGCT
CAGCGATGCAAGCTTTCTAGACCAT
BO30329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slx1-RB | 894 | CG18271-PB | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slx1-RB | 1139 | CG18271-RB | 34..924 | 17..907 | 4455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:56:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4643543..4644421 | 29..907 | 4395 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:56:23 has no hits.
BO30329.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:14 Download gff for
BO30329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18271-RB | 23..913 | 17..909 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:08 Download gff for
BO30329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slx1-RB | 34..924 | 17..909 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:21 Download gff for
BO30329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slx1-RB | 34..924 | 17..909 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:21 Download gff for
BO30329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4643544..4644421 | 30..909 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:08 Download gff for
BO30329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 469266..470143 | 30..909 | 99 | | Plus |
BO30329.pep Sequence
Translation from 16 to 925
> BO30329.pep
MNSYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNP
KRRIRQHNLGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP
SLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLPLTVRWLET
DYERPFSKALPKHMEIVSGKVSISASQRRRPDDAVPPPPVAWASECHLCM
QEMEQPEKSRLGCTNQMCRLTCHMVCLANYLLGDEPGHYIPVGGECPLCE
TRLSWAALLQRKRLLLGVPEELQDHDEDLSDDIDVDSDIEDTPELSDASF
LDH
BO30329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slx1-PB | 297 | CG18271-PB | 1..297 | 1..297 | 1626 | 100 | Plus |