Clone BO30335 Report

Search the DGRC for BO30335

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:303
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG7367-RB
Protein status:BO30335.pep: Imported from assembly
Sequenced Size:1108

Clone Sequence Records

BO30335.complete Sequence

1108 bp assembled on 2011-09-27

GenBank Submission: KX799263

> BO30335.complete
GAAGTTATCAGTCGACATGTTAGCGCTTTGCTGGCTTTGTGGCCTGGCCC
TTAGTTGTTGGATGGTTGGCATTCGTGGTGAGGTGGCTCTAAATCAGGAG
GATTACAACAAAACCTGGATCTACATGCCCAATGGACAGGGTAAGCCTGA
GGTGGCCTATCTGGTGGAACCTCCGCCCGAAAACCGCATCAATCTGCCAC
AGCTCATCAAGTTCGAGCTGTACGGAAGCGACTCCAGTTCCAGTGCTGAT
TTCTGGATAGATGAGAATAACTTTGAGTTTCCGCAGCGCCACAAGCGAGA
CACCTGGCAGGAGATGGCGGAGAAATTCAATCCGGAACTGGACACCAAGA
TACTCGTTCACGGCTGGAAGTCCAGCACCATGAGCAATTCGATTCAATCG
ATTCGTGGTGCCTATATCGAACGTGGCCAGGTGAACGTGTTCGCCATCAA
CTGGAAGGATCAGGCGGATAATATATACTATCTAACACCGGCGCGATATA
CGGTTCAGGTGGGACGGGCGGTGGCCAAGCTAATTGATCTGCTGGTGGAG
GAGAAGGATGCGGATCCGAATAGGATCCATCTGATTGGCCACAGTCTGGG
CGCGCACATCATGGGCTATGCTGGTTCGTACACTAAGTACAGGGTAAACC
GCATCACTGGCTTGGATCCAGCTCGTCCCGCTTTCGAGGATTGCATTGGT
CCGGAGAATCACTTGGACGACACGGACGCCAACTTTGTGGATGTCATACA
CAGCTGTGCCGGATACCTGGGCTTTCGCAAACCCATCGGCATGGTGGATT
TCTATCCCAATGGCGGTGGACCACCGCAACCAGGCTGCAAGGAGCTGTCG
CAGATTTTCACTGGTTGCAGTCATGGACGTTCATATGAATATTACGCGGA
GTCTATTAACTCGCCCAAAGGATTTTACGGTGTTCCCTGCTCTGGACTGG
ATGAACTCAAGGGAAAAAATTGCACCGGCGGCAAGATCCTAATGGGTGAT
CCAGTTCCTCGAGAAGCTCGCGGAATATTCTTTGTGAAGACGGCCAACAA
ACCGAGCTACGCCTTGGGTATCGATGATTTATGGAGTAATGCAAGCTTTC
TAGACCAT

BO30335.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7367-RD 1077 CG7367-PD 1..1074 17..1090 5370 100 Plus
CG7367-RB 1077 CG7367-PB 1..1074 17..1090 5370 100 Plus
CG7367-RC 1170 CG7367-PC 143..1167 66..1090 5125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7367-RD 1454 CG7367-RD 283..1356 17..1090 5370 100 Plus
CG7367-RB 1493 CG7367-RB 322..1395 17..1090 5370 100 Plus
CG7367-RC 1265 CG7367-RC 143..1167 66..1090 5125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8027308..8027941 860..227 3170 100 Minus
2L 23513712 2L 8027012..8027241 1090..861 1150 100 Minus
2L 23513712 2L 8028014..8028177 228..65 820 100 Minus
2L 23513712 2L 8028643..8028691 65..17 245 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:08:21 has no hits.

BO30335.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-27 16:29:54 Download gff for BO30335.complete
Subject Subject Range Query Range Percent Splice Strand
CG7367-RB 327..1395 22..1092 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:08 Download gff for BO30335.complete
Subject Subject Range Query Range Percent Splice Strand
CG7367-RB 327..1395 22..1092 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:02 Download gff for BO30335.complete
Subject Subject Range Query Range Percent Splice Strand
CG7367-RB 327..1395 22..1092 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:02 Download gff for BO30335.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8027009..8027241 861..1092 99 <- Minus
2L 8027308..8027939 229..860 100 <- Minus
2L 8028014..8028176 66..228 100 <- Minus
2L 8028643..8028686 22..65 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:08 Download gff for BO30335.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8027009..8027241 861..1092 99 <- Minus
arm_2L 8027308..8027939 229..860 100 <- Minus
arm_2L 8028014..8028176 66..228 100 <- Minus
arm_2L 8028643..8028686 22..65 100   Minus

BO30335.pep Sequence

Translation from 16 to 1108

> BO30335.pep
MLALCWLCGLALSCWMVGIRGEVALNQEDYNKTWIYMPNGQGKPEVAYLV
EPPPENRINLPQLIKFELYGSDSSSSADFWIDENNFEFPQRHKRDTWQEM
AEKFNPELDTKILVHGWKSSTMSNSIQSIRGAYIERGQVNVFAINWKDQA
DNIYYLTPARYTVQVGRAVAKLIDLLVEEKDADPNRIHLIGHSLGAHIMG
YAGSYTKYRVNRITGLDPARPAFEDCIGPENHLDDTDANFVDVIHSCAGY
LGFRKPIGMVDFYPNGGGPPQPGCKELSQIFTGCSHGRSYEYYAESINSP
KGFYGVPCSGLDELKGKNCTGGKILMGDPVPREARGIFFVKTANKPSYAL
GIDDLWSNASFLDH

BO30335.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7367-PD 358 CG7367-PD 1..358 1..358 1957 100 Plus
CG7367-PB 358 CG7367-PB 1..358 1..358 1957 100 Plus
CG7367-PC 389 CG7367-PC 47..389 16..358 1857 99.4 Plus
CG6675-PC 386 CG6675-PC 143..384 104..351 410 37.7 Plus
CG6675-PB 390 CG6675-PB 147..388 104..351 410 37.7 Plus