BO30338.complete Sequence
451 bp assembled on 2011-09-22
GenBank Submission: KX795438
> BO30338.complete
GAAGTTATCAGTCGACATGCGATACTCCATGGCAATGATCCCGATTCTGG
GCCTGCTGCTCGTAGCACTGATCCACGCCGCTCCCGTTGAGGTCGTCTAC
ACGGGCGAAAGTTGCGCCTGTCCCACCCAACTGGGTTACCAGCTAAATGT
GCCCAATACCCCAAAGCCAAAGAAGTATGTCGGTGGCGAGTACGGCTATC
GGGTGGAGAAGCCCGTCCAGACGAAAGCCAAGATTACCTACAGCTTTGAC
TTCACTGTGGAGCAGCCGAGGACACCGGCGCCGCCCAAGAACAATCCCGC
CAAGCTGTATGCCAAGGTGGACCGGATCACAGTCAACAAAGCGGATTGCC
AGGCCAAGAACAAGTCAACATGCGGCTGCTCGAGTTGCTCCGGCCAAAAA
CCCAGCTACGGCGAAGACGCGGGCTACGGCTACGCAAGCTTTCTAGACCA
T
BO30338.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:59:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp7Fb-RB | 420 | CG15350-PB | 1..417 | 17..433 | 2085 | 100 | Plus |
| Cp7Fb-RA | 1503 | CG15350-PA | 1..394 | 17..410 | 1955 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp7Fb-RB | 775 | CG15350-RB | 34..454 | 13..433 | 2090 | 99.8 | Plus |
| Cp7Fb-RA | 2093 | CG15350-RA | 34..431 | 13..410 | 1960 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:59:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8473870..8474201 | 13..344 | 1645 | 99.7 | Plus |
| X | 23542271 | X | 8474343..8474409 | 344..410 | 320 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:59:03 has no hits.
BO30338.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:17 Download gff for
BO30338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fb-RB | 670..1086 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:37:23 Download gff for
BO30338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fb-RB | 38..454 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:16 Download gff for
BO30338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fb-RB | 38..454 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:16 Download gff for
BO30338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8473874..8474201 | 17..344 | 100 | -> | Plus |
| X | 8474344..8474404 | 345..405 | 100 | -> | Plus |
| X | 8475723..8475750 | 406..435 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:37:23 Download gff for
BO30338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8369756..8369783 | 406..435 | 93 | | Plus |
| arm_X | 8367907..8368234 | 17..344 | 100 | -> | Plus |
| arm_X | 8368377..8368437 | 345..405 | 100 | -> | Plus |
BO30338.pep Sequence
Translation from 16 to 451
> BO30338.pep
MRYSMAMIPILGLLLVALIHAAPVEVVYTGESCACPTQLGYQLNVPNTPK
PKKYVGGEYGYRVEKPVQTKAKITYSFDFTVEQPRTPAPPKNNPAKLYAK
VDRITVNKADCQAKNKSTCGCSSCSGQKPSYGEDAGYGYASFLDH
BO30338.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp7Fb-PB | 139 | CG15350-PB | 1..139 | 1..139 | 749 | 100 | Plus |
| Cp7Fb-PA | 500 | CG15350-PA | 1..131 | 1..131 | 697 | 99.2 | Plus |
