BO30366.complete Sequence
1168 bp assembled on 2011-09-22
GenBank Submission: KX795522
> BO30366.complete
GAAGTTATCAGTCGACATGAGCCCCAAGCTGCATGAGTTTGCGGTGGTGC
TACTGCGCGATGGTCAGGCCACGCCCTGGGGCATTCGTTTGGTGGGCGGC
AACGATCTGGACACGCCGCTAATTATCACCAGGGTGCAAGTGGGCAGCCC
AGCGCATGGCGAACTTCTAAGAGGCGACATCATCTCGAAGATCGGCGAGT
ACGACGCACGCGACCTGAGTCATGCGGATGCACAGCAGCTGTTCCGCGGC
GCTGGCAACGAGATCCGCCTGGTGGTGCACAGGGACAACAAAATCGCCTA
CACGCAGGGTGCAACTCAGGAGGCAGGTCCTGGATCTCGGAGCAACTCCA
CTTTGCCGCCGGTCACTCCGGATCTGATGCCCCACCGCGGTCCGTCGCCC
TTTTTGCCCGGACCCAGCCACTTTGAGAGGGCCCTCCAGTTGCCGGTGGA
CACGTTGCCGCAGACCGTGTTTCCCCAGCTGAACTCATCCGGTGGCTATG
AGGTGCCATCGACTGTGTTCTCACCCAAGCCAACCAGGGACCATCAACAA
GACGTCGATGAGGAGCAGGCGGCCATTGTGAATCAGCCCTACCGTACAAC
TCCGCTGGTCCTGCCCGGCGCCAAAGTGAAGAAGGATGCGCCCACGACAG
AGTCCTACTTGAGGCACTACCCCAACCCGGCTGTGCGCGCCCACCCAGGA
CACGACTACCATGACAGTATCATGAAGCAGCGCGTGGCCGACACCATGCT
GCACAAGGTGGTCGGTTCGGAAGCCGACACTGGCCGCGTCTTCCACAAGC
AATTCAACTCGCCCATTGGCCTGTACTCCAACAACAACATCGAGGACACC
ATCAGATCCACAGTTCCCTATAAGAAAACTGTCCAGTACGATCCCAGGAA
CAGCGAAACCTACAGAGCCATTCAAGAAGAGGGCGGCTACAGCAACTATG
GCCAATCCTCGCCACAGGAAGTGACCATTCCTGTGCAGACTAAGGTCTAT
CAGCCCAATAGATTGGTTCCAGGAAAGAAACCAGTATCAGCGCCAGTATC
CCGGCCGCCGTACAATGTGGTAAACACCCACGATGAGAACATACGCCAGA
GCGGCTCCTTCAATCGTCTCATGTACAGCGTGATTGGTGCCACCGAGTAC
GCAAGCTTTCTAGACCAT
BO30366.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:38:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Zasp66-RK | 1137 | CG6416-PK | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Zasp66-RN | 1221 | CG6416-PN | 200..1218 | 132..1150 | 5095 | 100 | Plus |
Zasp66-RM | 969 | CG6416-PM | 1..853 | 17..869 | 4265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:39:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Zasp66-RK | 1642 | CG6416-RK | 186..1319 | 17..1150 | 5670 | 100 | Plus |
Zasp66-RN | 1793 | CG6416-RN | 312..1330 | 132..1150 | 5095 | 100 | Plus |
Zasp66-RM | 1554 | CG6416-RM | 186..1038 | 17..869 | 4265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:38:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8627424..8627730 | 280..586 | 1535 | 100 | Plus |
3L | 28110227 | 3L | 8634580..8634785 | 584..789 | 1030 | 100 | Plus |
3L | 28110227 | 3L | 8637439..8637598 | 868..1027 | 800 | 100 | Plus |
3L | 28110227 | 3L | 8626960..8627110 | 133..283 | 755 | 100 | Plus |
3L | 28110227 | 3L | 8626394..8626512 | 17..135 | 595 | 100 | Plus |
3L | 28110227 | 3L | 8638267..8638350 | 1067..1150 | 420 | 100 | Plus |
3L | 28110227 | 3L | 8635002..8635081 | 788..867 | 400 | 100 | Plus |
3L | 28110227 | 3L | 8638155..8638198 | 1026..1069 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:38:58 has no hits.
BO30366.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:22 Download gff for
BO30366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zasp66-RK | 186..1319 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:51:46 Download gff for
BO30366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zasp66-RK | 186..1319 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:02:15 Download gff for
BO30366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zasp66-RK | 186..1319 | 17..1152 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:02:15 Download gff for
BO30366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8626394..8626510 | 17..133 | 100 | -> | Plus |
3L | 8626961..8627109 | 134..282 | 100 | -> | Plus |
3L | 8627427..8627730 | 283..586 | 100 | -> | Plus |
3L | 8634583..8634783 | 587..787 | 100 | -> | Plus |
3L | 8635002..8635081 | 788..867 | 100 | -> | Plus |
3L | 8637439..8637598 | 868..1027 | 100 | -> | Plus |
3L | 8638157..8638195 | 1028..1066 | 100 | -> | Plus |
3L | 8638267..8638350 | 1067..1152 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:51:46 Download gff for
BO30366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8619494..8619610 | 17..133 | 100 | -> | Plus |
arm_3L | 8620061..8620209 | 134..282 | 100 | -> | Plus |
arm_3L | 8620527..8620830 | 283..586 | 100 | -> | Plus |
arm_3L | 8627683..8627883 | 587..787 | 100 | -> | Plus |
arm_3L | 8628102..8628181 | 788..867 | 100 | -> | Plus |
arm_3L | 8630539..8630698 | 868..1027 | 100 | -> | Plus |
arm_3L | 8631257..8631295 | 1028..1066 | 100 | -> | Plus |
arm_3L | 8631367..8631450 | 1067..1152 | 97 | | Plus |
BO30366.pep Sequence
Translation from 16 to 1168
> BO30366.pep
MSPKLHEFAVVLLRDGQATPWGIRLVGGNDLDTPLIITRVQVGSPAHGEL
LRGDIISKIGEYDARDLSHADAQQLFRGAGNEIRLVVHRDNKIAYTQGAT
QEAGPGSRSNSTLPPVTPDLMPHRGPSPFLPGPSHFERALQLPVDTLPQT
VFPQLNSSGGYEVPSTVFSPKPTRDHQQDVDEEQAAIVNQPYRTTPLVLP
GAKVKKDAPTTESYLRHYPNPAVRAHPGHDYHDSIMKQRVADTMLHKVVG
SEADTGRVFHKQFNSPIGLYSNNNIEDTIRSTVPYKKTVQYDPRNSETYR
AIQEEGGYSNYGQSSPQEVTIPVQTKVYQPNRLVPGKKPVSAPVSRPPYN
VVNTHDENIRQSGSFNRLMYSVIGATEYASFLDH
BO30366.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Zasp66-PK | 378 | CG6416-PK | 1..378 | 1..378 | 1998 | 100 | Plus |
Zasp66-PF | 402 | CG6416-PF | 1..402 | 1..378 | 1963 | 94 | Plus |
Zasp66-PN | 406 | CG6416-PN | 68..406 | 40..378 | 1794 | 100 | Plus |
Zasp66-PE | 430 | CG6416-PE | 68..430 | 40..378 | 1759 | 93.4 | Plus |
Zasp66-PM | 322 | CG6416-PM | 1..321 | 1..321 | 1512 | 90 | Plus |