Clone BO30374 Report

Search the DGRC for BO30374

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:303
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG12963-RE
Protein status:BO30374.pep: Imported from assembly
Sequenced Size:643

Clone Sequence Records

BO30374.complete Sequence

643 bp assembled on 2011-09-22

GenBank Submission: KX795485

> BO30374.complete
GAAGTTATCAGTCGACATGGAGCGAATAACATCGCCGGTGCTCGCGTATC
CACGTGGATATACCGAATTTTCGGATCACAAAATGTCGAATATACCGCCG
TATTTGGTGTTCTTCTTCCTGGCCTTCATTTCCTGTGCGGTCACCTTCTG
CTGCCTGAGATTCTGCATTTGGGTGTGCTTCGAGGCCAGGGATTCCAGGA
GTCGCAGACGCCGACATGATCGTAATGTATTCAACGCACAGGAGGATCCT
TCATCGAACCGCTATGGCGACATTTTCTTCATCGAACCCGGCAGCGTGGA
GGCCAACCGCATTCGCGATCAACTGGAAAAGGATGAAAAGGATTTACCCA
GCTACGACGAGGTGATGCGCATGTGTAACCTGACCACTCCCACAGCAGCA
GCGGCTGGAATGCCTGTTCCCCAATCGCCCCTCGGTGTACCCAGTCCCAT
TGGAATCGCGGCACTGCCGGCGCCACCGTATTCGGAGACAGATCCACATT
CCTCGTCCGCCGCAGAAGCCACTGTCATCGCAATGGAACCGATGGAGCCA
TCCACCTCCCGCGCGGCACAGATTCCACCCAGCTCCGGATCTGGTCCTCC
TGCTCCATTGCCAACGACAGCGGTGGCAAGCTTTCTAGACCAT

BO30374.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG12963-RE 612 CG12963-PE 1..609 17..625 3045 100 Plus
CG12963-RD 561 CG12963-PD 145..558 212..625 2055 99.8 Plus
CG12963-RJ 540 CG12963-PJ 129..537 217..625 2045 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG12963-RE 1108 CG12963-RE 284..893 16..625 3050 100 Plus
CG12963-RD 814 CG12963-RD 186..599 212..625 2055 99.8 Plus
CG12963-RJ 782 CG12963-RJ 159..567 217..625 2045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15561814..15562221 218..625 2040 100 Plus
2R 25286936 2R 15559520..15559722 16..218 1015 100 Plus
Blast to na_te.dros performed 2014-11-27 07:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 3427..3468 332..291 111 73.8 Minus

BO30374.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:33 Download gff for BO30374.complete
Subject Subject Range Query Range Percent Splice Strand
CG12963-RE 9..617 17..627 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:00 Download gff for BO30374.complete
Subject Subject Range Query Range Percent Splice Strand
CG12963-RE 285..893 17..627 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:54 Download gff for BO30374.complete
Subject Subject Range Query Range Percent Splice Strand
CG12963-RE 285..893 17..627 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:54 Download gff for BO30374.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15559521..15559722 17..218 100 -> Plus
2R 15561815..15562221 219..627 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:00 Download gff for BO30374.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11447026..11447227 17..218 100 -> Plus
arm_2R 11449320..11449726 219..627 99   Plus

BO30374.pep Sequence

Translation from 16 to 643

> BO30374.pep
MERITSPVLAYPRGYTEFSDHKMSNIPPYLVFFFLAFISCAVTFCCLRFC
IWVCFEARDSRSRRRRHDRNVFNAQEDPSSNRYGDIFFIEPGSVEANRIR
DQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPSPIGIAAL
PAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSGPPAPLPT
TAVASFLDH

BO30374.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG12963-PE 203 CG12963-PE 1..203 1..203 1077 100 Plus
CG12963-PH 197 CG12963-PH 7..197 29..203 738 76.4 Plus
CG12963-PJ 179 CG12963-PJ 11..179 35..203 727 85.5 Plus
CG12963-PI 179 CG12963-PI 7..179 33..203 722 83.8 Plus
CG12963-PD 186 CG12963-PD 38..186 55..203 722 93.3 Plus