BO30374.complete Sequence
643 bp assembled on 2011-09-22
GenBank Submission: KX795485
> BO30374.complete
GAAGTTATCAGTCGACATGGAGCGAATAACATCGCCGGTGCTCGCGTATC
CACGTGGATATACCGAATTTTCGGATCACAAAATGTCGAATATACCGCCG
TATTTGGTGTTCTTCTTCCTGGCCTTCATTTCCTGTGCGGTCACCTTCTG
CTGCCTGAGATTCTGCATTTGGGTGTGCTTCGAGGCCAGGGATTCCAGGA
GTCGCAGACGCCGACATGATCGTAATGTATTCAACGCACAGGAGGATCCT
TCATCGAACCGCTATGGCGACATTTTCTTCATCGAACCCGGCAGCGTGGA
GGCCAACCGCATTCGCGATCAACTGGAAAAGGATGAAAAGGATTTACCCA
GCTACGACGAGGTGATGCGCATGTGTAACCTGACCACTCCCACAGCAGCA
GCGGCTGGAATGCCTGTTCCCCAATCGCCCCTCGGTGTACCCAGTCCCAT
TGGAATCGCGGCACTGCCGGCGCCACCGTATTCGGAGACAGATCCACATT
CCTCGTCCGCCGCAGAAGCCACTGTCATCGCAATGGAACCGATGGAGCCA
TCCACCTCCCGCGCGGCACAGATTCCACCCAGCTCCGGATCTGGTCCTCC
TGCTCCATTGCCAACGACAGCGGTGGCAAGCTTTCTAGACCAT
BO30374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:54:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-RE | 612 | CG12963-PE | 1..609 | 17..625 | 3045 | 100 | Plus |
CG12963-RD | 561 | CG12963-PD | 145..558 | 212..625 | 2055 | 99.8 | Plus |
CG12963-RJ | 540 | CG12963-PJ | 129..537 | 217..625 | 2045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-RE | 1108 | CG12963-RE | 284..893 | 16..625 | 3050 | 100 | Plus |
CG12963-RD | 814 | CG12963-RD | 186..599 | 212..625 | 2055 | 99.8 | Plus |
CG12963-RJ | 782 | CG12963-RJ | 159..567 | 217..625 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15561814..15562221 | 218..625 | 2040 | 100 | Plus |
2R | 25286936 | 2R | 15559520..15559722 | 16..218 | 1015 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:53:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 332..291 | 111 | 73.8 | Minus |
BO30374.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:33 Download gff for
BO30374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RE | 9..617 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:00 Download gff for
BO30374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RE | 285..893 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:54 Download gff for
BO30374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RE | 285..893 | 17..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:54 Download gff for
BO30374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15559521..15559722 | 17..218 | 100 | -> | Plus |
2R | 15561815..15562221 | 219..627 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:00 Download gff for
BO30374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11447026..11447227 | 17..218 | 100 | -> | Plus |
arm_2R | 11449320..11449726 | 219..627 | 99 | | Plus |
BO30374.pep Sequence
Translation from 16 to 643
> BO30374.pep
MERITSPVLAYPRGYTEFSDHKMSNIPPYLVFFFLAFISCAVTFCCLRFC
IWVCFEARDSRSRRRRHDRNVFNAQEDPSSNRYGDIFFIEPGSVEANRIR
DQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPSPIGIAAL
PAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSGPPAPLPT
TAVASFLDH
BO30374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-PE | 203 | CG12963-PE | 1..203 | 1..203 | 1077 | 100 | Plus |
CG12963-PH | 197 | CG12963-PH | 7..197 | 29..203 | 738 | 76.4 | Plus |
CG12963-PJ | 179 | CG12963-PJ | 11..179 | 35..203 | 727 | 85.5 | Plus |
CG12963-PI | 179 | CG12963-PI | 7..179 | 33..203 | 722 | 83.8 | Plus |
CG12963-PD | 186 | CG12963-PD | 38..186 | 55..203 | 722 | 93.3 | Plus |