BO30378.complete Sequence
496 bp assembled on 2011-09-22
GenBank Submission: KX794426
> BO30378.complete
GAAGTTATCAGTCGCCATGCATTTAAGAAAATTTTTGTATTGTTGGCCAT
TGAAATATGGCGTTATTACTGTGGGCATTGCTTTTGGACTCACGGACTTC
ATCGTGGGCAGCATTGCATGGGACATGGTTATCAGAAACAAATATCCAGA
CTATGTGGTCGAGTTCTTCAGAACCATGGACACCCGAATCTGTGTGTCCG
GATTTGCCACCGTTTTCTGGTTGATGATGACCAACCACTTTCTTTTGATC
TATGCCGTCTTTTACCACAAACTTTTGATAATCGGAACTTGGCTGTTGAT
AAACTACATGGTATTTTTGTTCACCCTTGTCACCGTGTTGTTGGATAGCT
TGCTAATCCTTAGAATAATTGCCCTCGGATACTGTTTGATCGTGGTGAAG
TCCTATTATAGTGAGTTGGCTGAGTCTCAGGAGGAATCATCCGATTCCAG
TGAGGAATCAACTAGTAGTGATAGCGATGCAAGCTTTCTAGACCAT
BO30378.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:56:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42493-RA | 465 | CG42493-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42493-RA | 590 | CG42493-RA | 67..528 | 17..478 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11778592..11778840 | 17..265 | 1245 | 100 | Plus |
2R | 25286936 | 2R | 11779064..11779173 | 369..478 | 550 | 100 | Plus |
2R | 25286936 | 2R | 11778905..11779007 | 266..368 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:56:50 has no hits.
BO30378.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:35 Download gff for
BO30378.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42493-RA | 15..476 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:30 Download gff for
BO30378.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42493-RA | 67..528 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:07:52 Download gff for
BO30378.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42493-RA | 67..528 | 17..480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:07:52 Download gff for
BO30378.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11778592..11778840 | 17..265 | 100 | -> | Plus |
2R | 11778905..11779007 | 266..368 | 100 | -> | Plus |
2R | 11779064..11779173 | 369..480 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:30 Download gff for
BO30378.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7666097..7666345 | 17..265 | 100 | -> | Plus |
arm_2R | 7666410..7666512 | 266..368 | 100 | -> | Plus |
arm_2R | 7666569..7666678 | 369..480 | 98 | | Plus |
BO30378.pep Sequence
Translation from 16 to 496
> BO30378.pep
MHLRKFLYCWPLKYGVITVGIAFGLTDFIVGSIAWDMVIRNKYPDYVVEF
FRTMDTRICVSGFATVFWLMMTNHFLLIYAVFYHKLLIIGTWLLINYMVF
LFTLVTVLLDSLLILRIIALGYCLIVVKSYYSELAESQEESSDSSEESTS
SDSDASFLDH
BO30378.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42493-PA | 154 | CG42493-PA | 1..154 | 1..154 | 799 | 100 | Plus |