BO30379.complete Sequence
394 bp assembled on 2011-09-22
GenBank Submission: KX797930
> BO30379.complete
GAAGTTATCAGTCGACATGAGCAGTCAAATTAAAAAGTCCAAAACGACCA
CCAAGAAATTGGTGAAATCATCTCCGAAAGCTCAACTTCCAAAAGCTGCG
GCACAGAATCAAATTTTTAGTTGCCAATTCGAGGTGTTTGGTCATGTGCA
AGGTGTCTTCTTTCGCAAGGCCATTGAGCTGGGCATAACTGGCTGGTGCA
TGAACACAACTCAAGGAACGGTTCAGGGAATGCTCGAAGGATCCTTGGAC
CAAATGACTGATATGAAATACTGGCTGCAGCACAAGGGAAGTCCTCGTTC
GGTGATCGAAAAGGCTGTATTCTCCGAGAATGAACCACTGCCCATCAACA
ACTTTAAGATGTTCTCGATTCGTCGCGCAAGCTTTCTAGACCAT
BO30379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34161-RB | 363 | CG34161-PB | 1..360 | 17..376 | 1800 | 100 | Plus |
| CG34161-RC | 378 | CG34161-PC | 1..375 | 17..376 | 1615 | 96 | Plus |
| CG34161-RA | 378 | CG34161-PA | 1..375 | 17..376 | 1615 | 96 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34161-RB | 553 | CG34161-RB | 66..425 | 17..376 | 1800 | 100 | Plus |
| CG34161-RC | 563 | CG34161-RC | 66..440 | 17..376 | 1615 | 96 | Plus |
| CG34161-RA | 577 | CG34161-RA | 66..440 | 17..376 | 1615 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10581500..10581637 | 154..17 | 690 | 100 | Minus |
| 2L | 23513712 | 2L | 10581094..10581205 | 376..265 | 560 | 100 | Minus |
| 2L | 23513712 | 2L | 10581260..10581358 | 265..167 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:58:39 has no hits.
BO30379.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:35 Download gff for
BO30379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34161-RB | 26..385 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:43 Download gff for
BO30379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34161-RB | 66..425 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:31 Download gff for
BO30379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34161-RB | 66..425 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:31 Download gff for
BO30379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10581092..10581205 | 265..378 | 98 | <- | Minus |
| 2L | 10581261..10581355 | 170..264 | 100 | <- | Minus |
| 2L | 10581424..10581440 | 153..169 | 100 | <- | Minus |
| 2L | 10581502..10581637 | 17..152 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:43 Download gff for
BO30379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10581261..10581355 | 170..264 | 100 | <- | Minus |
| arm_2L | 10581424..10581440 | 153..169 | 100 | <- | Minus |
| arm_2L | 10581502..10581637 | 17..152 | 100 | | Minus |
| arm_2L | 10581092..10581205 | 265..378 | 98 | <- | Minus |
BO30379.pep Sequence
Translation from 16 to 394
> BO30379.pep
MSSQIKKSKTTTKKLVKSSPKAQLPKAAAQNQIFSCQFEVFGHVQGVFFR
KAIELGITGWCMNTTQGTVQGMLEGSLDQMTDMKYWLQHKGSPRSVIEKA
VFSENEPLPINNFKMFSIRRASFLDH
BO30379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34161-PB | 120 | CG34161-PB | 1..120 | 1..120 | 623 | 100 | Plus |
| CG34161-PC | 125 | CG34161-PC | 1..125 | 1..120 | 607 | 96 | Plus |
| CG34161-PA | 125 | CG34161-PA | 1..125 | 1..120 | 607 | 96 | Plus |
| CG18371-PA | 110 | CG18371-PA | 7..99 | 32..119 | 231 | 50.5 | Plus |
| CG11052-PD | 149 | CG11052-PD | 29..146 | 6..118 | 221 | 39 | Plus |
