BO30423.complete Sequence
829 bp assembled on 2011-09-22
GenBank Submission: KX796108
> BO30423.complete
GAAGTTATCAGTCGACATGTGGCGCCATCGCCACCTGGCCACTATCCTCC
TGCTGGCGGTGTGCGTTTCCCAAGGATCTGGATTAGCCTTGGACCAACCC
GAAGGACGCGTTGTGGGTGGAAAAGCGGCGGCGGCCAATAGTGCTCCGTA
TATAGTGTCCATGCAGTACGGAGGAACTCACTATTGCGCCGCTAACATCA
TTAATTCCAACTGGCTGGTAACGGCTGCTCACTGCCTGGCCAATAGGAAT
CAAGTACTTGGAAGCACCCTGGTGGCTGGAAGCATTGCGGTGGCCGGAAC
AGCGAGCACAACACAGAAGAGGCAAATCACCCACTATGTGATCAATGATC
TTTATACCGGCGGAACTGTGCCCTATGACATCGGATTGATTTACACGCCC
ACCGCCTTCACTTGGACCGCTGCAGTGGCTCCGGTGAAGCTGCCATCGTC
CGGCGTGAGGCCAACTGGAAAGGCTGACCTCTTTGGCTGGGGCAGTACTA
GCAAAACGAATAGCCCCTCATATCCGAAAACCCTCCAGGAGGCGAAGAAC
ATACCCATCATAAGCCTCGACTCCTGCGCTGCGGCACTTGGCTCTAAGGG
TCAGGATGTGCACACCACGAACCTGTGCACAGGTCCTCTCACCGGCGGCA
CCAGCTTTTGCACCTCGGACTCCGGTGGTCCGCTGGTCCAGGGAAACGTT
CTAATCGGCATCGTGTCTTGGGGAAAACTTCCATGTGGTCAGCCCAACTC
TCCGTCGGTGTATGTCCAGGTCTCCTCGTTCATAACATGGATAGCAGCCA
ACCAAAAGAAAGCAAGCTTTCTAGACCAT
BO30423.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phae2-RC | 798 | CG16997-PC | 1..795 | 17..811 | 3975 | 100 | Plus |
Phae2-RB | 798 | CG16997-PB | 1..795 | 17..811 | 3975 | 100 | Plus |
Phae1-RB | 813 | CG16996-PB | 93..800 | 97..804 | 1065 | 76.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:46:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phae2-RC | 1147 | CG16997-RC | 38..833 | 16..811 | 3980 | 100 | Plus |
Phae2-RB | 886 | CG16997-RB | 38..833 | 16..811 | 3980 | 100 | Plus |
Phae1-RB | 1248 | CG16996-RB | 319..1026 | 97..804 | 1065 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:46:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12111147..12111942 | 16..811 | 3980 | 100 | Plus |
2L | 23513712 | 2L | 12109735..12110442 | 97..804 | 1065 | 76.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:46:48 has no hits.
BO30423.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:29 Download gff for
BO30423.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16997-RB | 16..810 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:56 Download gff for
BO30423.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phae2-RB | 39..833 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:04:33 Download gff for
BO30423.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phae2-RB | 39..833 | 17..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:04:33 Download gff for
BO30423.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12111148..12111942 | 17..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:56 Download gff for
BO30423.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12111148..12111942 | 17..813 | 99 | | Plus |
BO30423.pep Sequence
Translation from 16 to 829
> BO30423.pep
MWRHRHLATILLLAVCVSQGSGLALDQPEGRVVGGKAAAANSAPYIVSMQ
YGGTHYCAANIINSNWLVTAAHCLANRNQVLGSTLVAGSIAVAGTASTTQ
KRQITHYVINDLYTGGTVPYDIGLIYTPTAFTWTAAVAPVKLPSSGVRPT
GKADLFGWGSTSKTNSPSYPKTLQEAKNIPIISLDSCAAALGSKGQDVHT
TNLCTGPLTGGTSFCTSDSGGPLVQGNVLIGIVSWGKLPCGQPNSPSVYV
QVSSFITWIAANQKKASFLDH
BO30423.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phae2-PC | 265 | CG16997-PC | 1..265 | 1..265 | 1395 | 100 | Plus |
Phae2-PB | 265 | CG16997-PB | 1..265 | 1..265 | 1395 | 100 | Plus |
Phae1-PB | 270 | CG16996-PB | 9..268 | 5..264 | 1082 | 78.5 | Plus |
Phae1-PA | 270 | CG16996-PA | 9..268 | 5..264 | 1082 | 78.5 | Plus |
CG7142-PA | 334 | CG7142-PA | 84..323 | 36..259 | 597 | 49.4 | Plus |