Clone BO30424 Report

Search the DGRC for BO30424

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:304
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG30026-RB
Protein status:BO30424.pep: Imported from assembly
Sequenced Size:718

Clone Sequence Records

BO30424.complete Sequence

718 bp assembled on 2011-09-22

GenBank Submission: KX795693

> BO30424.complete
GAAGTTATCAGTCGACATGAAGTCTGCTATTATTTGCGTGTTCTTCATCG
CGACTGCAACGTGGGCTCAGGATACAAGGCCAGAAGTTCCCATCTATCTA
CCGCCGCCCTCTATAACAACGACGACCACAGAGGCACCAGTAACGACCAC
TATAACAGAGGAGCCAACAACAGAATCCTTGACAACTACAACAACTGAGA
CCAGTTCCACATTCTCAACAACCGAGCCTGCCGCAACTACAACAACGGAA
ATATCCACAACTTCGACAACCGAACCAAGTACTACAACTTTAACAACAAA
GAAGATCCCATCAACAACAACAGCAATCATCACAACTACAGGAGTAGAAA
CCTCCACAACTACAACGACAGAAACCACCACAGCTTCCACAACACAAGGC
GATCCAATATATCCGACTTACAGACCTCCCTACATGCGGCCCTCGACCTC
AGGGATACCTCCCGTTTCTTCCACAAACCCCTGGATCTGGAACAATGGCA
ATCCGGCAGTAAAATGTTATCTGCGAAATCAACAGGAATACAGAAGTGAT
TGTTATGGAGTGGGTTGGCATCCGACGACAATTTGTTACCGCTGCTGCTA
CTATGATCAAAACAGAATCGCCGGATGCAGTAAAATTCACCGAGGACGGT
GTTCGTGGTACGATTATGCTCGATGGATATCACCGAATTTCTATGTCTAT
GCAAGCTTTCTAGACCAT

BO30424.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:47:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG30026-RB 687 CG30026-PB 1..684 17..700 3420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:47:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30026-RB 821 CG30026-RB 44..727 17..700 3420 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:47:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11408865..11409406 558..17 2710 100 Minus
2R 25286936 2R 11408670..11408813 700..557 720 100 Minus
Blast to na_te.dros performed 2014-11-27 07:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2539 154..382 278 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2391..2697 111..425 240 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2521 216..409 237 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6921 183..394 224 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2491 228..409 208 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6715..6814 302..398 186 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6901 136..326 186 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2425 282..394 184 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2722..2925 223..417 177 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2401 309..394 167 68.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2744..2989 68..322 165 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6865 234..398 150 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6843 276..409 150 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..6853 249..398 149 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1517..1591 308..379 133 68 Plus
roo 9092 roo DM_ROO 9092bp 1071..1154 310..393 132 66.7 Plus

BO30424.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:29 Download gff for BO30424.complete
Subject Subject Range Query Range Percent Splice Strand
CG30026-RB 26..709 17..702 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:02 Download gff for BO30424.complete
Subject Subject Range Query Range Percent Splice Strand
CG30026-RB 44..727 17..702 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:04:46 Download gff for BO30424.complete
Subject Subject Range Query Range Percent Splice Strand
CG30026-RB 44..727 17..702 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:04:46 Download gff for BO30424.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11408668..11408812 558..702 98 <- Minus
2R 11408866..11409406 17..557 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:02 Download gff for BO30424.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7296173..7296317 558..702 98 <- Minus
arm_2R 7296371..7296911 17..557 100   Minus

BO30424.pep Sequence

Translation from 16 to 718

> BO30424.pep
MKSAIICVFFIATATWAQDTRPEVPIYLPPPSITTTTTEAPVTTTITEEP
TTESLTTTTTETSSTFSTTEPAATTTTEISTTSTTEPSTTTLTTKKIPST
TTAIITTTGVETSTTTTTETTTASTTQGDPIYPTYRPPYMRPSTSGIPPV
SSTNPWIWNNGNPAVKCYLRNQQEYRSDCYGVGWHPTTICYRCCYYDQNR
IAGCSKIHRGRCSWYDYARWISPNFYVYASFLDH

BO30424.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG30026-PB 228 CG30026-PB 1..228 1..228 1247 100 Plus
CG34054-PA 161 CG34054-PA 35..150 85..219 247 43.4 Plus
CG34220-PA 726 CG34220-PA 92..220 34..155 241 45.8 Plus
Muc96D-PA 881 CG31439-PA 624..742 34..153 238 47.5 Plus
Muc96D-PA 881 CG31439-PA 136..233 29..126 237 53.1 Plus
Muc96D-PA 881 CG31439-PA 455..578 34..153 235 45.2 Plus
CG34220-PA 726 CG34220-PA 58..173 13..126 233 47.4 Plus
Muc96D-PA 881 CG31439-PA 537..628 34..125 233 54.3 Plus
Muc96D-PA 881 CG31439-PA 594..686 34..126 233 53.8 Plus
Muc96D-PA 881 CG31439-PA 398..515 34..153 232 46.7 Plus
Muc96D-PA 881 CG31439-PA 530..622 34..126 232 53.8 Plus
Muc96D-PA 881 CG31439-PA 259..351 34..126 231 54.8 Plus
Muc96D-PA 881 CG31439-PA 483..595 13..126 231 47.4 Plus
CG34220-PA 726 CG34220-PA 250..388 17..155 230 41.4 Plus
Muc96D-PA 881 CG31439-PA 394..534 13..153 230 40.4 Plus
Muc96D-PA 881 CG31439-PA 425..538 13..126 229 47.4 Plus
Muc96D-PA 881 CG31439-PA 558..671 13..126 229 46.5 Plus
CG46026-PA 666 CG46026-PA 387..526 31..153 229 45.2 Plus
Muc96D-PA 881 CG31439-PA 223..319 34..126 228 53.6 Plus
Muc96D-PA 881 CG31439-PA 126..281 3..153 227 39.7 Plus
Muc96D-PA 881 CG31439-PA 507..647 13..153 227 40.4 Plus
Muc96D-PA 881 CG31439-PA 557..678 13..134 227 43.4 Plus
Muc96D-PA 881 CG31439-PA 254..399 13..153 226 40.4 Plus
Muc96D-PA 881 CG31439-PA 368..466 34..134 226 53.5 Plus
Muc96D-PA 881 CG31439-PA 502..642 13..153 226 39.7 Plus
Muc96D-PA 881 CG31439-PA 560..681 34..153 226 44.3 Plus
Muc96D-PA 881 CG31439-PA 155..296 12..153 225 39.4 Plus
Muc96D-PA 881 CG31439-PA 307..448 13..153 224 40.8 Plus
Muc96D-PA 881 CG31439-PA 357..452 31..126 224 52.1 Plus
Muc96D-PA 881 CG31439-PA 249..389 13..153 223 40.4 Plus
Muc96D-PA 881 CG31439-PA 377..496 34..153 223 44.2 Plus
Muc96D-PA 881 CG31439-PA 453..590 13..153 223 40.4 Plus
Muc96D-PA 881 CG31439-PA 225..325 34..134 222 49.5 Plus
Muc96D-PA 881 CG31439-PA 282..422 13..153 222 40.4 Plus
Muc96D-PA 881 CG31439-PA 492..617 31..153 222 43.7 Plus
Muc96D-PA 881 CG31439-PA 189..329 13..153 221 39.7 Plus
Muc96D-PA 881 CG31439-PA 341..454 13..126 221 44.7 Plus
Muc96D-PA 881 CG31439-PA 384..503 31..153 221 43.9 Plus
Muc96D-PA 881 CG31439-PA 420..560 13..153 221 39.7 Plus
Muc96D-PA 881 CG31439-PA 220..339 34..153 220 44.2 Plus
Muc96D-PA 881 CG31439-PA 222..362 13..153 220 39 Plus
Muc96D-PA 881 CG31439-PA 414..535 32..153 220 44.3 Plus
Muc96D-PA 881 CG31439-PA 584..724 13..153 220 38.3 Plus
Muc96D-PA 881 CG31439-PA 476..616 13..153 219 39 Plus
CG34220-PA 726 CG34220-PA 92..252 13..155 218 37.3 Plus
Muc96D-PA 881 CG31439-PA 125..271 7..153 218 38.1 Plus
Muc96D-PA 881 CG31439-PA 340..453 13..126 218 44.7 Plus
Muc96D-PA 881 CG31439-PA 493..635 13..153 218 39.2 Plus
Muc96D-PA 881 CG31439-PA 124..221 29..126 216 48 Plus
Muc96D-PA 881 CG31439-PA 187..306 34..153 216 43.3 Plus
Muc96D-PA 881 CG31439-PA 368..508 13..153 216 38.3 Plus
Muc96D-PA 881 CG31439-PA 642..777 13..153 216 40.4 Plus
Muc96D-PA 881 CG31439-PA 317..453 34..153 215 41.6 Plus
Muc96D-PA 881 CG31439-PA 551..674 34..153 215 43.5 Plus
Muc96D-PA 881 CG31439-PA 568..688 35..153 215 43.8 Plus
Muc96D-PA 881 CG31439-PA 204..323 7..126 212 42.5 Plus
Muc96D-PA 881 CG31439-PA 106..210 29..134 211 50 Plus
CG34220-PA 726 CG34220-PA 10..156 4..153 209 36 Plus
CG34220-PA 726 CG34220-PA 44..161 30..153 207 45.2 Plus
CG34220-PA 726 CG34220-PA 235..348 18..126 196 43.2 Plus
CG34220-PA 726 CG34220-PA 500..618 17..130 194 42 Plus
CG34220-PA 726 CG34220-PA 485..623 18..153 190 37.1 Plus
CG34220-PA 726 CG34220-PA 402..593 17..155 176 32.3 Plus
CG34220-PA 726 CG34220-PA 524..633 29..129 168 42.7 Plus
CG34220-PA 726 CG34220-PA 279..429 7..151 164 31.1 Plus
CG34220-PA 726 CG34220-PA 353..496 13..155 163 32.6 Plus
CG34220-PA 726 CG34220-PA 223..334 22..126 160 38.4 Plus
CG34220-PA 726 CG34220-PA 203..315 18..126 151 34.5 Plus