BO30482.complete Sequence
568 bp assembled on 2011-09-22
GenBank Submission: KX796832
> BO30482.complete
GAAGTTATCAGTCGACATGAAAGGTTTTCAGATAATCGGATTACTTGGAT
TGTTTGCACTCCTTGTAAGTGGATCGACCTCGTCTGGAGAAGATACCAAC
ATCAAACTAACAACAGACGAATCTACTACTGTGGAGGATACCACGGAGGT
TTTAGTCACAACACTACCACCTCCAGTCCTGTGTGCTGATGAAGATCTGT
TTCTCCCAGCACCCGACTGCAGAGAGTATTATCAATGCCTGTACGGTGAG
GGAATTTTAAAGATATGTCCAGACGGCCTCTATTGGGATCGGGAGCTGAA
TGTTTGCGCCTGGGACTCACAGCATTGTGCTGATGACAAGAACGAGACCA
CCACACCATCGACCTTGAATTGCGCATCCGGGTTACCATTTTTGCCCTAT
ATACCGGACTGCACTAAGTTTATCCAGTGCGTCTACAATATTGGCTTTAA
ACTAAGCTGCCCGAGTGGTTTGTATTGGAACCAACCTCTTCAATCGTGTG
ACTATACCTGCGATAATGCGATTGAGTTCTCTGGCGCACACCAAGTGCAA
GCAAGCTTTCTAGACCAT
BO30482.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-RA | 537 | CG42397-PA | 1..534 | 17..550 | 2670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-RA | 651 | CG42397-RA | 35..570 | 15..550 | 2680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11973166..11973695 | 550..21 | 2650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:42:14 has no hits.
BO30482.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:23 Download gff for
BO30482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 37..570 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:09 Download gff for
BO30482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 37..570 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:05 Download gff for
BO30482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 37..570 | 17..552 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:05 Download gff for
BO30482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11973164..11973696 | 17..552 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:09 Download gff for
BO30482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11966264..11966796 | 17..552 | 99 | | Minus |
BO30482.pep Sequence
Translation from 16 to 568
> BO30482.pep
MKGFQIIGLLGLFALLVSGSTSSGEDTNIKLTTDESTTVEDTTEVLVTTL
PPPVLCADEDLFLPAPDCREYYQCLYGEGILKICPDGLYWDRELNVCAWD
SQHCADDKNETTTPSTLNCASGLPFLPYIPDCTKFIQCVYNIGFKLSCPS
GLYWNQPLQSCDYTCDNAIEFSGAHQVQASFLDH
BO30482.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-PA | 178 | CG42397-PA | 1..178 | 1..178 | 984 | 100 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1580..1734 | 8..164 | 246 | 34.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1684..1792 | 51..162 | 209 | 35.4 | Plus |
| CG17826-PA | 751 | CG17826-PA | 27..128 | 54..165 | 180 | 36.3 | Plus |
| CG43294-PB | 124 | CG43294-PB | 13..123 | 67..165 | 138 | 32.5 | Plus |
| CG43294-PA | 124 | CG43294-PA | 13..123 | 67..165 | 138 | 32.5 | Plus |
