BO30483.complete Sequence
460 bp assembled on 2011-09-22
GenBank Submission: KX794638
> BO30483.complete
GAAGTTATCAGTCGACATGGAATCACTCGCAAAATATCGATACAGTTTGG
TGGCTGGCTCCTTCGCAGCTGCAGGAAGCTTTTTCGGAAAACTTCCCAGC
CACCTGAGCGCCCAAAAACTACTGAATACTTCGCAAATAAATGAAGACTT
TTCTTATTTAGAAATAGCATTACTTCAGCTGCTGCCACTAGTGTTAATGG
TAACATGCAACGTTTGCAACTTGCGTTTCTTTTTGAAGGCCCTGCAAATG
ACTGAACAAACTTTAACGTGCGTCGTTTTAACTGCCGCTTCGAATTATGT
CTTATCGTTTGTCCTAGGTGCGCTTGTTTATCGGGAGCCACTGACAGTAC
TATCTGGCATCGGAATAACTCTCATTCTGGCTGGTCTTTGGTTTCTTTGC
GACGGAGGAACAGTCGAGTCCGAAAAGCAGGACAAAATGGAAGCAAGCTT
TCTAGACCAT
BO30483.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42495-RA | 429 | CG42495-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42495-RA | 654 | CG42495-RA | 75..500 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18667644..18667793 | 158..307 | 750 | 100 | Plus |
3L | 28110227 | 3L | 18667435..18667579 | 17..161 | 725 | 100 | Plus |
3L | 28110227 | 3L | 18667842..18667981 | 303..442 | 685 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:42:32 has no hits.
BO30483.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:24 Download gff for
BO30483.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42495-RA | 75..500 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:15 Download gff for
BO30483.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42495-RA | 75..500 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:11 Download gff for
BO30483.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42495-RA | 75..500 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:11 Download gff for
BO30483.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18667435..18667579 | 17..161 | 100 | -> | Plus |
3L | 18667648..18667793 | 162..307 | 100 | -> | Plus |
3L | 18667847..18667981 | 308..444 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:15 Download gff for
BO30483.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18660535..18660679 | 17..161 | 100 | -> | Plus |
arm_3L | 18660748..18660893 | 162..307 | 100 | -> | Plus |
arm_3L | 18660947..18661081 | 308..444 | 98 | | Plus |
BO30483.pep Sequence
Translation from 16 to 460
> BO30483.pep
MESLAKYRYSLVAGSFAAAGSFFGKLPSHLSAQKLLNTSQINEDFSYLEI
ALLQLLPLVLMVTCNVCNLRFFLKALQMTEQTLTCVVLTAASNYVLSFVL
GALVYREPLTVLSGIGITLILAGLWFLCDGGTVESEKQDKMEASFLDH
BO30483.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42495-PA | 142 | CG42495-PA | 1..142 | 1..142 | 709 | 100 | Plus |