Clone BO30487 Report

Search the DGRC for BO30487

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:304
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCG34302-RB
Protein status:BO30487.pep: Imported from assembly
Sequenced Size:544

Clone Sequence Records

BO30487.complete Sequence

544 bp assembled on 2011-09-22

GenBank Submission: KX794741

> BO30487.complete
GAAGTTATCAGTCGACATGGATCCACTCCGCCGTAATCCTCTTTTGGAAA
TTACCAAATGTGAGATGTGCTCCAATTTGGTATACCATTTTCCGACTGGA
TTGTGTGCCCGCTGCTTAACTCTTTGGGCCGGAAAGAAACCAATGGACGG
ACTGAGACTGACCGTGGACCAATCGAAGGCTTTCCTTGTGAACATTGCTC
GCTGTTCGGATGCCCAGGATAAGAGCCATATGGACCCCACCTTTCAACGC
GTGATTGCCGAGGTGAGATTGCAGCGCCAACAGAAACTTGAGCTGTTCCA
GAAGATTCGCCAGCAGTTACAGCTTTCCGTACTCACCGGTTCCTTCTATG
ACAAAAATCCAAAATACGAAGTCAATGAGGACTATTGGAATATACCGGAT
ATCGTCGATGCAGACATGCTGATGTTTCAGAAAAATATTGACCTGCTTGC
AGATATACCCACCATTTCGTCAGAGATCAATGACGAAAATAAATACAATA
AGCGCGAAAATAGAAAACGAAATTTGGCAAGCTTTCTAGACCAT

BO30487.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34302-RB 513 CG34302-PB 1..510 17..526 2550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34302-RB 825 CG34302-RB 213..722 17..526 2550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9823102..9823611 526..17 2550 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:44:06 has no hits.

BO30487.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:35:26 Download gff for BO30487.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 213..722 17..528 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:32 Download gff for BO30487.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 213..722 17..528 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:41 Download gff for BO30487.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 213..722 17..528 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:41 Download gff for BO30487.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9823098..9823611 17..528 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:32 Download gff for BO30487.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5648820..5649333 17..528 99   Minus

BO30487.pep Sequence

Translation from 16 to 544

> BO30487.pep
MDPLRRNPLLEITKCEMCSNLVYHFPTGLCARCLTLWAGKKPMDGLRLTV
DQSKAFLVNIARCSDAQDKSHMDPTFQRVIAEVRLQRQQKLELFQKIRQQ
LQLSVLTGSFYDKNPKYEVNEDYWNIPDIVDADMLMFQKNIDLLADIPTI
SSEINDENKYNKRENRKRNLASFLDH

BO30487.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34302-PB 170 CG34302-PB 1..170 1..170 896 100 Plus