BO30492.complete Sequence
1063 bp assembled on 2011-09-27
GenBank Submission: KX797333
> BO30492.complete
GAAGTTATCAGTCGACATGAGAGTTCCGCCATGTGGATTCCATTTGTGTG
TCATTTTGGCCATAGTCGCGGAGATTAGAGGATTTTCGATGGAGGACAAG
TGCAAATTGTGGGCTGGAACTGGCTATATTGGTGATCCCAGTGATTGCCA
GGCCTGGGGATATTGCCAGGACAACAAACTCATCGATAGACGTAGCTGCA
CTGAAGGATTACTATACAGTTTCCGAGATGGCACCTGCAAGAGGGCATCC
GATACGATTTGTCATTCCCAGCTCTCGGAGATTTGCGCCAGCCTCGAGCC
TTGGAATTACGTGGCCAACCCAGCTGATTGTCGGAGATTCGTCAAGTGCG
CGGATTTGGATGATCCCACTTGGGGCGACTGTGGTGTGGGTCAGGTGTTT
AGCAACAAGAAGCAGACCTGCCTCGAGGAGGTTGCCGGCTGTCCACAGGA
TAATATCTGCTCCCATATGAAAGATGGCTCCTTTGTGGGCGATCCCAAGA
GCTGTCAAATCTACTATAAATGCCATAATGGATTTGGCACCATGTTGAAT
TGCTCCGTTGGGCGATACTTTAATCGCAAAACGGGTAATTGCCAATCCTG
GATGCCGCATTACTGTTCCAAGGATGATGAGGATAACATATTAACGCCAC
CATCCACGGACCATAATATCTGCTCCAAGTATTATCAACGGGATAGAGAT
GGAGTGCAACTCCTGCCGGATCTGATGACCTGTTACGGATATTACTCCTG
CACATCCCAGTTCGACGTGGGCAAGTGGAGCAGCTGTCCTTGGGGACTGC
ACTTTGAGTGGTGGAGCCAGCGGTGTGGCTCGCCGAAAGACAATAGCTGC
TCCTACGATCGCTGCGCCAATAGGAACCAACTAATGGTGGCCACCATTAA
CACGGGCTGCAGGGAGTTCACGATCTGTCAAGATAATCGTTCGAAGAGCT
CGCAAAAGTGTCCGGAGGACTATCCATATTTCAATGAGCTATTGCGACAG
TGCACCGATGAATATCCCAATCATAGGGTGTGCTACATGGATGGAGCAAG
CTTTCTAGACCAT
BO30492.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:07:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5897-RB | 960 | CG5897-PB | 1..957 | 89..1045 | 4785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5897-RB | 1671 | CG5897-RB | 14..1042 | 17..1045 | 5145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:07:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11887888..11888911 | 1045..22 | 5120 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:07:15 has no hits.
BO30492.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-27 16:24:09 Download gff for
BO30492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5897-RB | 14..1042 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:04:56 Download gff for
BO30492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5897-RB | 14..1042 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:34 Download gff for
BO30492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5897-RB | 14..1042 | 17..1047 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:13:34 Download gff for
BO30492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11887886..11888916 | 17..1047 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:04:56 Download gff for
BO30492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11880986..11882016 | 17..1047 | 99 | | Minus |
BO30492.pep Sequence
Translation from 16 to 1063
> BO30492.pep
MRVPPCGFHLCVILAIVAEIRGFSMEDKCKLWAGTGYIGDPSDCQAWGYC
QDNKLIDRRSCTEGLLYSFRDGTCKRASDTICHSQLSEICASLEPWNYVA
NPADCRRFVKCADLDDPTWGDCGVGQVFSNKKQTCLEEVAGCPQDNICSH
MKDGSFVGDPKSCQIYYKCHNGFGTMLNCSVGRYFNRKTGNCQSWMPHYC
SKDDEDNILTPPSTDHNICSKYYQRDRDGVQLLPDLMTCYGYYSCTSQFD
VGKWSSCPWGLHFEWWSQRCGSPKDNSCSYDRCANRNQLMVATINTGCRE
FTICQDNRSKSSQKCPEDYPYFNELLRQCTDEYPNHRVCYMDGASFLDH
BO30492.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5897-PB | 319 | CG5897-PB | 1..319 | 25..343 | 1861 | 100 | Plus |
CG6933-PE | 351 | CG6933-PE | 8..345 | 10..339 | 610 | 34.8 | Plus |
CG6933-PB | 351 | CG6933-PB | 8..345 | 10..339 | 610 | 34.8 | Plus |
CG6933-PA | 351 | CG6933-PA | 8..345 | 10..339 | 610 | 34.8 | Plus |
CG6933-PD | 363 | CG6933-PD | 20..357 | 10..339 | 610 | 34.8 | Plus |