Clone BO30501 Report

Search the DGRC for BO30501

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:305
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG33465-RC
Protein status:BO30501.pep: Imported from assembly
Sequenced Size:1498

Clone Sequence Records

BO30501.complete Sequence

1498 bp assembled on 2011-09-30

GenBank Submission: KX797852

> BO30501.complete
GAAGTTATCAGTCGACATGTCTCGTGTGCTTTCGTTAGCTCTGATCGGAT
TAGTGCTCTGCCAGGGTTTAGCACAACTGCTGGATAAAAAGTGTCACGAT
CCAAAAACTTCAGAGAATATAAATTTCAATCATGGTGCAACTGAAACCGC
ACCCTGGATGGCAAGCATATACAAGAATAACCAATTTATTTGCGACGGAA
CGCTTGTTCACAAATTGTTCGTCCTAACGGCCGCGAGTTGCATATCGAAA
GATAGTCAACTGTACGTGCTTTTCGGGATGTACAACCAATACAGGGATGC
ATCACAATTCTTTAACAACGAACAATATGGAGTGGCGGTTGCTTTGCAAC
ATTCCAATTTCCGCCCAAACAATGGCGTCAACGATATAGGCCTTTTAAGA
CTTTACGGTGAAGTGACGCATTATGCCCACATCCGCCCGATTTGTATAAT
ATTAGATCATGTGGTAAAGTCAGCACCATTTGAAAGGTTTGAGGGCTTTG
GATGGCAACAACAAGGAACAGAAGCATCCAGCCAAGTGAGGCAGACCGTA
TATCTCTCTCAGAAAAAACCATTTGAGTGCCATCGAAATGGTCAGTTGTT
GCCCATTAACGAGGGGCAATTCTGCGCCGGCAATAGGGATAGAAGTTTCT
GTAGAAGTAACTCCGGCAGTCCGTTGACAGCTGATTTCACCTACGGCGTA
AAAAATATCACCGTTCAGGTTGGATTGGTGAGCTACGGCAGCGAGTTGTG
CAGCCCAACTAGCGTCTATACAGATGTTGTCGCCTTCAAGGACTGGATAT
ATAATACTGTCAGGAATTTCGAAACTAAAGGTGATCAGGTTGTGTACGAA
GAATGCAGGAGCAACTGGGCGGAGGATGTCCTTGTTCGCCTGTGGGAGGT
ATCTCTGCATCAGAATACTTTCTCTGGCGTGCTTATTACGAATAGATTTG
TCTTGACGGTGGCCAGTGCTTTCCCTAACATTCCTTTAGTAATGAAGGTG
GAAACCAAATATCTCAAAAGTTTCGACGTGGAATCGATCCATACCCATCC
CAGATTCACGCATTCATCAATGGACAACAATATTGCATTGCTTAAACTAG
CTCACGATGTGCCAAACTCAGATCTTGTCAAGCCAATCTGCATTGTCCCA
AGTCCCAAATTGCCAAGGATGTTAACTACACTTGTGGATGAGACCACCAA
TGATTTCAGAGGCGTCAGGAATGTTACTTTGAACGCCATCAATCACATTG
AATGCGCCAGAAGAATTGGGAAACCACTTAAAAGTAACCAATTTTGTGTC
GCACAACCTATTGATTTTAAAGTTCAAGCGCCAGGCTCAATCATAGGCAC
ATATAGAAATATCGGCGATGGTAATAGGTACTATCTTTTTGGCCTAATGA
GCTACAGTAAGGACGGCATGGTGGTCTACACCTATATACAAAGCTATTTG
GATTGGATAATGGATAAAGTTTATTATAATGCAAGCTTTCTAGACCAT

BO30501.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:51:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG33465-RC 1467 CG33465-PC 1..1464 17..1480 7320 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG33465-RC 1610 CG33465-RC 30..1493 17..1480 7320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:51:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15819948..15820468 945..425 2605 100 Minus
2R 25286936 2R 15819231..15819591 1480..1120 1805 100 Minus
2R 25286936 2R 15820887..15821085 215..17 995 100 Minus
2R 25286936 2R 15820557..15820720 425..262 820 100 Minus
2R 25286936 2R 15819645..15819772 1121..994 640 100 Minus
2R 25286936 2R 15819843..15819892 994..945 250 100 Minus
2R 25286936 2R 15820769..15820817 264..216 245 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:51:39 has no hits.

BO30501.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:19 Download gff for BO30501.complete
Subject Subject Range Query Range Percent Splice Strand
CG33465-RC 11..1474 17..1482 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:14 Download gff for BO30501.complete
Subject Subject Range Query Range Percent Splice Strand
CG33465-RC 30..1493 17..1482 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:06:14 Download gff for BO30501.complete
Subject Subject Range Query Range Percent Splice Strand
CG33465-RC 30..1493 17..1482 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:06:14 Download gff for BO30501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15820557..15820720 262..425 100 <- Minus
2R 15820772..15820817 216..261 100 <- Minus
2R 15820887..15821085 17..215 100   Minus
2R 15819949..15820467 426..944 100 <- Minus
2R 15819229..15819589 1122..1482 99 <- Minus
2R 15819645..15819772 994..1121 100 <- Minus
2R 15819844..15819892 945..993 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:14 Download gff for BO30501.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11706734..11707094 1122..1482 99 <- Minus
arm_2R 11707150..11707277 994..1121 100 <- Minus
arm_2R 11707349..11707397 945..993 100 <- Minus
arm_2R 11707454..11707972 426..944 100 <- Minus
arm_2R 11708062..11708225 262..425 100 <- Minus
arm_2R 11708277..11708322 216..261 100 <- Minus
arm_2R 11708392..11708590 17..215 100   Minus

BO30501.pep Sequence

Translation from 16 to 1498

> BO30501.pep
MSRVLSLALIGLVLCQGLAQLLDKKCHDPKTSENINFNHGATETAPWMAS
IYKNNQFICDGTLVHKLFVLTAASCISKDSQLYVLFGMYNQYRDASQFFN
NEQYGVAVALQHSNFRPNNGVNDIGLLRLYGEVTHYAHIRPICIILDHVV
KSAPFERFEGFGWQQQGTEASSQVRQTVYLSQKKPFECHRNGQLLPINEG
QFCAGNRDRSFCRSNSGSPLTADFTYGVKNITVQVGLVSYGSELCSPTSV
YTDVVAFKDWIYNTVRNFETKGDQVVYEECRSNWAEDVLVRLWEVSLHQN
TFSGVLITNRFVLTVASAFPNIPLVMKVETKYLKSFDVESIHTHPRFTHS
SMDNNIALLKLAHDVPNSDLVKPICIVPSPKLPRMLTTLVDETTNDFRGV
RNVTLNAINHIECARRIGKPLKSNQFCVAQPIDFKVQAPGSIIGTYRNIG
DGNRYYLFGLMSYSKDGMVVYTYIQSYLDWIMDKVYYNASFLDH

BO30501.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG33465-PC 488 CG33465-PC 1..488 1..488 2593 100 Plus
CG43742-PB 474 CG43742-PB 6..467 6..481 671 36.2 Plus
CG30187-PD 451 CG30187-PD 1..451 48..488 477 30.9 Plus
CG30187-PC 440 CG30187-PC 1..440 48..488 446 29.9 Plus
CG43110-PA 483 CG43110-PA 10..482 9..488 430 26.9 Plus