BO30503.complete Sequence
499 bp assembled on 2012-04-24
GenBank Submission: KX797639
> BO30503.complete
GAAGTTATCAGTCGACATGGATATGGATTTGAATAACGACTTGGAGAAAC
GCATTTCGGATGCCTTTTGTGTGTTCGATCATCATGGCGACAAGTTCATC
GACGTTAGAGAAGTGGGCACTGTGCTGAGACTCCTGGGCTGTGTTCCCAC
CGAGGAGGAGGTGAACGAAGTAATTTCGGCTACAGAATCGGAGGAGACCA
GTGGCGAAGTGCATTTGACTAAATTTTTGCCACACGTCTCGCAACTGCTC
ATGGAAAGAAAAATGGAGCCTGCTCCGCCAGAGAAAATTCTCCAGGCCTT
TAAGATCTTGGATCCGGAGAACAAGGGCTATCTCACCAAGGAGAGCTTTG
GCAAACTGATGATGGAGGAGGGCGAGCCTTTCACCCAAGAGGAAATGGAC
GAAATGTGGCCAGTGGCCATAGACCCAATTAGCGGACACATACCCTATGA
GTTCTACCTGAATCAGCTCATGGTCTATCTGGCAAGCTTTCTAGACCAT
BO30503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11041-RB | 468 | CG11041-PB | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11041-RB | 537 | CG11041-RB | 28..494 | 15..481 | 2335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20146214..20146445 | 30..261 | 1160 | 100 | Plus |
| 2R | 25286936 | 2R | 20146501..20146713 | 262..474 | 1065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:04:24 has no hits.
BO30503.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:17 Download gff for
BO30503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11041-RB | 15..479 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:18 Download gff for
BO30503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11041-RB | 30..494 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:36 Download gff for
BO30503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11041-RB | 30..494 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:36 Download gff for
BO30503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20146214..20146445 | 30..261 | 100 | -> | Plus |
| 2R | 20146501..20146716 | 262..478 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:18 Download gff for
BO30503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16033719..16033950 | 30..261 | 100 | -> | Plus |
| arm_2R | 16034006..16034221 | 262..478 | 99 | | Plus |
BO30503.pep Sequence
Translation from 16 to 499
> BO30503.pep
MDMDLNNDLEKRISDAFCVFDHHGDKFIDVREVGTVLRLLGCVPTEEEVN
EVISATESEETSGEVHLTKFLPHVSQLLMERKMEPAPPEKILQAFKILDP
ENKGYLTKESFGKLMMEEGEPFTQEEMDEMWPVAIDPISGHIPYEFYLNQ
LMVYLASFLDH
BO30503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11041-PB | 155 | CG11041-PB | 1..155 | 1..155 | 816 | 100 | Plus |
| CG9406-PA | 186 | CG9406-PA | 7..153 | 5..151 | 569 | 70.1 | Plus |
| Cam-PD | 149 | CG8472-PD | 15..146 | 15..151 | 184 | 32.6 | Plus |
| Cam-PC | 149 | CG8472-PC | 15..146 | 15..151 | 184 | 32.6 | Plus |
| Cam-PE | 149 | CG8472-PE | 15..146 | 15..151 | 184 | 32.6 | Plus |
