BO30509.complete Sequence
457 bp assembled on 2011-09-30
GenBank Submission: KX799735
> BO30509.complete
GAAGTTATCAGTAGACATGCGTCGCACTTGGGTCCTGTTTTACTTATTCC
TAATTGGGTTGGCATTGGTAAAGACCACACCGAAAGAACTTCACTCAGAA
TCGATTTTTGAAGATGACGTCGCTCTAAGGTCCAAGTCAATCATTACAAC
AACCCGACCACCTGTGACAATCAGGCGCGTTGTAGCCAAGTCAAAGGGTA
AGGATCCAGAAAGAACTGACCTCCACCGCAAGCACCTCACACATCACAAA
CATCACTCAAAAAACAAAAAAAAGAATCCACATAATCGTGCCGAAGCGAA
TCGAAACAAGGATCATAGTCCCCATGATCCCCACAAAAACCTGAAAAGAA
AGGCAGAGGCACTCCCTAAGTCAAATCAGAATATAAATGGCACTACTTCT
CTGGAAGCCAAGAGTACGTCTTTAAAAGATGTACATAAGGCAAGCTTTCT
AGACCAT
BO30509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:54:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-RC | 426 | CG32457-PC | 1..423 | 17..439 | 2115 | 100 | Plus |
CG32457-RB | 492 | CG32457-PB | 191..489 | 141..439 | 1495 | 100 | Plus |
CG32457-RB | 492 | CG32457-PB | 1..124 | 17..140 | 620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:54:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-RC | 555 | CG32457-RC | 28..450 | 17..439 | 2115 | 100 | Plus |
CG32457-RB | 621 | CG32457-RB | 218..516 | 141..439 | 1495 | 100 | Plus |
CG32457-RB | 621 | CG32457-RB | 28..151 | 17..140 | 620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:54:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22987859..22988157 | 141..439 | 1495 | 100 | Plus |
3L | 28110227 | 3L | 22987669..22987792 | 17..140 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:54:04 has no hits.
BO30509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:22 Download gff for
BO30509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RC | 28..450 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:37 Download gff for
BO30509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RC | 28..450 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:01 Download gff for
BO30509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RC | 28..450 | 17..441 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:01 Download gff for
BO30509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22987859..22988157 | 141..441 | 99 | | Plus |
3L | 22987669..22987792 | 17..140 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:37 Download gff for
BO30509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22980769..22980892 | 17..140 | 100 | -> | Plus |
arm_3L | 22980959..22981257 | 141..441 | 99 | | Plus |
BO30509.pep Sequence
Translation from 16 to 457
> BO30509.pep
MRRTWVLFYLFLIGLALVKTTPKELHSESIFEDDVALRSKSIITTTRPPV
TIRRVVAKSKGKDPERTDLHRKHLTHHKHHSKNKKKNPHNRAEANRNKDH
SPHDPHKNLKRKAEALPKSNQNINGTTSLEAKSTSLKDVHKASFLDH
BO30509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-PC | 141 | CG32457-PC | 1..141 | 1..141 | 742 | 100 | Plus |
CG32457-PB | 163 | CG32457-PB | 1..163 | 1..141 | 708 | 85.9 | Plus |