Clone BO30509 Report

Search the DGRC for BO30509

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:305
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG32457-RC
Protein status:BO30509.pep: Imported from assembly
Sequenced Size:457

Clone Sequence Records

BO30509.complete Sequence

457 bp assembled on 2011-09-30

GenBank Submission: KX799735

> BO30509.complete
GAAGTTATCAGTAGACATGCGTCGCACTTGGGTCCTGTTTTACTTATTCC
TAATTGGGTTGGCATTGGTAAAGACCACACCGAAAGAACTTCACTCAGAA
TCGATTTTTGAAGATGACGTCGCTCTAAGGTCCAAGTCAATCATTACAAC
AACCCGACCACCTGTGACAATCAGGCGCGTTGTAGCCAAGTCAAAGGGTA
AGGATCCAGAAAGAACTGACCTCCACCGCAAGCACCTCACACATCACAAA
CATCACTCAAAAAACAAAAAAAAGAATCCACATAATCGTGCCGAAGCGAA
TCGAAACAAGGATCATAGTCCCCATGATCCCCACAAAAACCTGAAAAGAA
AGGCAGAGGCACTCCCTAAGTCAAATCAGAATATAAATGGCACTACTTCT
CTGGAAGCCAAGAGTACGTCTTTAAAAGATGTACATAAGGCAAGCTTTCT
AGACCAT

BO30509.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32457-RC 426 CG32457-PC 1..423 17..439 2115 100 Plus
CG32457-RB 492 CG32457-PB 191..489 141..439 1495 100 Plus
CG32457-RB 492 CG32457-PB 1..124 17..140 620 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32457-RC 555 CG32457-RC 28..450 17..439 2115 100 Plus
CG32457-RB 621 CG32457-RB 218..516 141..439 1495 100 Plus
CG32457-RB 621 CG32457-RB 28..151 17..140 620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22987859..22988157 141..439 1495 100 Plus
3L 28110227 3L 22987669..22987792 17..140 620 100 Plus
Blast to na_te.dros performed on 2014-11-27 12:54:04 has no hits.

BO30509.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:22 Download gff for BO30509.complete
Subject Subject Range Query Range Percent Splice Strand
CG32457-RC 28..450 17..441 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:37 Download gff for BO30509.complete
Subject Subject Range Query Range Percent Splice Strand
CG32457-RC 28..450 17..441 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:01 Download gff for BO30509.complete
Subject Subject Range Query Range Percent Splice Strand
CG32457-RC 28..450 17..441 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:01 Download gff for BO30509.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22987859..22988157 141..441 99   Plus
3L 22987669..22987792 17..140 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:37 Download gff for BO30509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22980769..22980892 17..140 100 -> Plus
arm_3L 22980959..22981257 141..441 99   Plus

BO30509.pep Sequence

Translation from 16 to 457

> BO30509.pep
MRRTWVLFYLFLIGLALVKTTPKELHSESIFEDDVALRSKSIITTTRPPV
TIRRVVAKSKGKDPERTDLHRKHLTHHKHHSKNKKKNPHNRAEANRNKDH
SPHDPHKNLKRKAEALPKSNQNINGTTSLEAKSTSLKDVHKASFLDH

BO30509.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32457-PC 141 CG32457-PC 1..141 1..141 742 100 Plus
CG32457-PB 163 CG32457-PB 1..163 1..141 708 85.9 Plus