BO30515.complete Sequence
715 bp assembled on 2011-09-30
GenBank Submission: KX799024
> BO30515.complete
GAAGTTATCAGTCGACATGCAGGAGTTAATAGTCGGCGGCATCGCCATCA
GTGGCGTTCCCTTCGCCAATGAGACGGTCGAGAAGGAAAGTCGCCAGAAT
CAGCTGAGTGCATCCACGCTAGAGGATCACACGCCGTTTCCCGGTCTGTC
CCGCATCACTCCATCGCTGATCCTTTGCGGTGCCGCGGCGGTGGTGCCCG
CCTACATGGACAAACTGGGCGTGAGCTGCGTCATCAACGTGGCGCCCGAG
CTGCCGGACACACCACTGCCCAGCCAGAAGAACCCGCTCTATCTCCGCAT
CATGGCCCAGGATCGCTCCGAGGTGGACTTGGCCAAGCATTTTGACGAGG
CGGCCGATCTGATCGAGGAGGTGCATCTCTCCGGCGGCTGCACGTTGATC
CACTGCGTGGCCGGCGTCAGCCGCTCGGCCAGCCTGTGCCTGGCCTATCT
AATGAAGCACGCCGGGATGAGCTTGCGCGAGGCCTACAAGCATGTGCAGG
CCATACGTCCGCAGGTTCGCCCGAACTCCGGATTCTTCCAGCAGCTGCGA
CGGTACGAGCAACAGCTGCGGGGCAGCAGCTCGGTGGCCATGGTGTACTT
CGCCTCGCTGGACAAGGAGATCCCCGACATACTGGAGCCCGAGTACAGGG
CCATGGAGGACTTCTACCAGCGCTACCGCAGCTCCCTCAAGAGGCGAGCA
AGCTTTCTAGACCAT
BO30515.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15528-RB | 684 | CG15528-PB | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15528-RB | 1032 | CG15528-RB | 173..855 | 15..697 | 3415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30048812..30049409 | 697..100 | 2990 | 100 | Minus |
| 3R | 32079331 | 3R | 30051856..30051940 | 99..15 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:56:04 has no hits.
BO30515.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:24 Download gff for
BO30515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15528-RB | 175..855 | 17..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:54 Download gff for
BO30515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15528-RB | 175..855 | 17..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:34 Download gff for
BO30515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15528-RB | 175..855 | 17..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:34 Download gff for
BO30515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30048810..30049409 | 100..699 | 99 | <- | Minus |
| 3R | 30051856..30051938 | 17..99 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:54 Download gff for
BO30515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25874532..25875131 | 100..699 | 99 | <- | Minus |
| arm_3R | 25877578..25877660 | 17..99 | 100 | | Minus |
BO30515.pep Sequence
Translation from 16 to 715
> BO30515.pep
MQELIVGGIAISGVPFANETVEKESRQNQLSASTLEDHTPFPGLSRITPS
LILCGAAAVVPAYMDKLGVSCVINVAPELPDTPLPSQKNPLYLRIMAQDR
SEVDLAKHFDEAADLIEEVHLSGGCTLIHCVAGVSRSASLCLAYLMKHAG
MSLREAYKHVQAIRPQVRPNSGFFQQLRRYEQQLRGSSSVAMVYFASLDK
EIPDILEPEYRAMEDFYQRYRSSLKRRASFLDH
BO30515.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15528-PB | 227 | CG15528-PB | 1..227 | 1..227 | 1159 | 100 | Plus |
| Mkp3-PA | 241 | CG14080-PA | 48..187 | 47..185 | 236 | 39.7 | Plus |
| Mkp3-PD | 411 | CG14080-PD | 218..357 | 47..185 | 236 | 39.7 | Plus |
| Mkp3-PB | 411 | CG14080-PB | 218..357 | 47..185 | 236 | 39.7 | Plus |
| puc-PB | 369 | CG7850-PB | 48..170 | 67..191 | 234 | 40.5 | Plus |
