BO30518.complete Sequence
790 bp assembled on 2011-09-30
GenBank Submission: KX798230
> BO30518.complete
GAAGTTATCAGTCGACATGAAGCGAACTCTCCTGATTTTGGCCATAGTTT
TTTGTGGTCTAGCTATTGTGAAGGCATTAGAGTGCCAGGAGTGCCTAGAG
GATAACGATGTGTATTGTGTAGACCAAACTTCCTATAGGAATTGCATCAA
AAGCAAGCCTTTTGGCAACGTGATAAGCTGCCCCGACGATACGGTTTGCA
CAAACTCGAAAAATGTTTGTGTGAAAAGCTCTGATCTAGCAGAATCTGAA
GTCGATGTCTGTGGAACCTCCGGTGGAAACCAATGTGCAACATGCACAAA
TCAGAAATATACTTGTGTTAGCAAAAATCAATTTGCGAGATGTTCCGAAT
CGGTTGTGGTCGACTCAAACATCTATGACTGCGATACTGATGAGATTTGC
AGTTCGGAAGCACTGGAAAAGTACGACAACATATGTACGCCTTCTTGTGT
CCTCGATTTTCTCGACGTGAGAGCCACTTGCAGCAACAGTGAATACACGA
CAACAACTACCGCAGCACCGACAACTGTCACACCCAGTACAGAGCAGAAA
AATAGTGCCTGTACTGAAGCTGAAAAAGATCTTCAAATACCTAAGGAAAC
CTTGTACTTCTTTACGATCTACAAGGAGGATACTTCCTGCCACACTTATC
TCTACTGCGAAAGAACTGAATCCACCGAATGGGACACTGTTTATTTGTCC
TGCCACCAACCCAAGCCATATTTCGATTCTACGACCAGCCTTTGCGTATC
GACGAAACCAACGGGATGCTCCGCAAGCTTTCTAGACCAT
BO30518.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:00:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33258-RC | 759 | CG33258-PC | 1..756 | 17..772 | 3780 | 100 | Plus |
CG33258-RB | 759 | CG33258-PB | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:00:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33258-RC | 819 | CG33258-RC | 42..797 | 17..772 | 3780 | 100 | Plus |
CG33258-RB | 964 | CG33258-RB | 42..797 | 17..772 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:00:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16083160..16083471 | 461..772 | 1560 | 100 | Plus |
3L | 28110227 | 3L | 16082779..16083089 | 150..460 | 1555 | 100 | Plus |
3L | 28110227 | 3L | 16082592..16082724 | 17..149 | 665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:00:07 has no hits.
BO30518.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:26 Download gff for
BO30518.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33258-RB | 42..797 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:40:35 Download gff for
BO30518.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33258-RB | 42..797 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:59 Download gff for
BO30518.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33258-RB | 42..797 | 17..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:59 Download gff for
BO30518.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16082592..16082724 | 17..149 | 100 | -> | Plus |
3L | 16082779..16083089 | 150..460 | 100 | -> | Plus |
3L | 16083160..16083471 | 461..774 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:40:35 Download gff for
BO30518.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16076260..16076571 | 461..774 | 99 | | Plus |
arm_3L | 16075692..16075824 | 17..149 | 100 | -> | Plus |
arm_3L | 16075879..16076189 | 150..460 | 100 | -> | Plus |
BO30518.pep Sequence
Translation from 16 to 790
> BO30518.pep
MKRTLLILAIVFCGLAIVKALECQECLEDNDVYCVDQTSYRNCIKSKPFG
NVISCPDDTVCTNSKNVCVKSSDLAESEVDVCGTSGGNQCATCTNQKYTC
VSKNQFARCSESVVVDSNIYDCDTDEICSSEALEKYDNICTPSCVLDFLD
VRATCSNSEYTTTTTAAPTTVTPSTEQKNSACTEAEKDLQIPKETLYFFT
IYKEDTSCHTYLYCERTESTEWDTVYLSCHQPKPYFDSTTSLCVSTKPTG
CSASFLDH
BO30518.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33258-PC | 252 | CG33258-PC | 1..252 | 1..252 | 1371 | 100 | Plus |
CG33258-PB | 252 | CG33258-PB | 1..252 | 1..252 | 1371 | 100 | Plus |
CG13075-PB | 339 | CG13075-PB | 1..252 | 1..252 | 675 | 50.4 | Plus |
CG32024-PA | 209 | CG32024-PA | 1..209 | 1..252 | 251 | 29.5 | Plus |
CG13312-PA | 342 | CG13312-PA | 30..247 | 23..254 | 196 | 24.9 | Plus |