BO30520.complete Sequence
574 bp assembled on 2011-09-30
GenBank Submission: KX794046
> BO30520.complete
GAAGTTATCAGTCGACATGACGACCCACCAGTTGCTAAACAAGAATGTTC
GCACCATGCCCTCCTGGGTGATGGAGGCAAATGACCGCATTGGGCCCAAA
CCGCCACCCACGCCACCAAACGGTGTGGCTGGTGGTCTTCCCAAGGCGCC
TGCTCTGCCGCCCAAGGCGAAGAGCACTCCCGAGCCGGACTACGAGATCA
TCGAATTCTCCAGCCAGCAGTACTCCAACGAACCGATGAAGACCACAGTG
ATCAGAACCAAGACACCAGATAACAAACTAAAGTGCACCTTGTGCGGTTC
CCAGAATCCCTGGGTAACCTGTGCCGAGTGCGCCGGCCAAATCTTTTGCG
CCTCCTGCGACGACATGTTCCACAAGCATCCCAAACGTAAGCAGCACATG
AGAAAGGCTGTGGAGCAGGGCACACCGCCGATTCCGCCAAAGGCACAGGC
CGGTGGTGGGGCACCACCACCAGTGGCACCTCCACGACGCAGCAAACGAG
GCCTTTTGACACCGTTTCTGGGCCGCAAGGATCAGGTACGCCACTGCACG
ATCTCCGCAAGCTTTCTAGACCAT
BO30520.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:02:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11321-RK | 543 | CG11321-PK | 1..540 | 17..556 | 2700 | 100 | Plus |
CG11321-RD | 543 | CG11321-PD | 1..540 | 17..556 | 2700 | 100 | Plus |
CG11321-RJ | 8397 | CG11321-PJ | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:02:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11321-RK | 763 | CG11321-RK | 129..668 | 17..556 | 2700 | 100 | Plus |
CG11321-RD | 783 | CG11321-RD | 149..688 | 17..556 | 2700 | 100 | Plus |
CG11321-RJ | 8906 | CG11321-RJ | 149..667 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6770335..6770534 | 269..70 | 1000 | 100 | Minus |
2L | 23513712 | 2L | 6769932..6770083 | 556..405 | 760 | 100 | Minus |
2L | 23513712 | 2L | 6770133..6770273 | 407..267 | 705 | 100 | Minus |
2L | 23513712 | 2L | 6770591..6770644 | 70..17 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:02:39 has no hits.
BO30520.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:27 Download gff for
BO30520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11321-RD | 130..669 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:46:10 Download gff for
BO30520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11321-RD | 130..669 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:09:50 Download gff for
BO30520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11321-RD | 149..688 | 17..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:09:50 Download gff for
BO30520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6769930..6770081 | 407..558 | 98 | <- | Minus |
2L | 6770134..6770270 | 270..406 | 100 | <- | Minus |
2L | 6770335..6770533 | 71..269 | 100 | <- | Minus |
2L | 6770591..6770644 | 17..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:46:10 Download gff for
BO30520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6769930..6770081 | 407..558 | 98 | <- | Minus |
arm_2L | 6770134..6770270 | 270..406 | 100 | <- | Minus |
arm_2L | 6770335..6770533 | 71..269 | 100 | <- | Minus |
arm_2L | 6770591..6770644 | 17..70 | 100 | | Minus |
BO30520.pep Sequence
Translation from 16 to 574
> BO30520.pep
MTTHQLLNKNVRTMPSWVMEANDRIGPKPPPTPPNGVAGGLPKAPALPPK
AKSTPEPDYEIIEFSSQQYSNEPMKTTVIRTKTPDNKLKCTLCGSQNPWV
TCAECAGQIFCASCDDMFHKHPKRKQHMRKAVEQGTPPIPPKAQAGGGAP
PPVAPPRRSKRGLLTPFLGRKDQVRHCTISASFLDH
BO30520.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11321-PK | 180 | CG11321-PK | 1..180 | 1..180 | 996 | 100 | Plus |
CG11321-PD | 180 | CG11321-PD | 1..180 | 1..180 | 996 | 100 | Plus |
CG11321-PF | 834 | CG11321-PF | 1..174 | 1..174 | 958 | 99.4 | Plus |
CG11321-PC | 834 | CG11321-PC | 1..174 | 1..174 | 958 | 99.4 | Plus |
CG11321-PH | 887 | CG11321-PH | 1..174 | 1..174 | 958 | 99.4 | Plus |