Clone BO30521 Report

Search the DGRC for BO30521

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:305
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG9395-RB
Protein status:BO30521.pep: Imported from assembly
Sequenced Size:1633

Clone Sequence Records

BO30521.complete Sequence

1633 bp assembled on 2012-04-24

GenBank Submission: KX799186

> BO30521.complete
GAAGTTATCAGTCGACATGAAGCGGGGCAAGAAGCAATGGGGCACCAGGG
AAAGATCAGGCATGAGCTTCCTTATCGTCATCACCTTCTTCGCCGTCTTT
GGACTAATCATTCTAACTGAGGTCTTCATGATCGACGAGCGCACCCACAG
CGGCATGTTGGCCATGAGGGCGGGCGGCGGTGGCGGTGCCAGTCTGGGCG
GACGGATGGGCGACTCGATGCCGGATTATGATAATGTTAAGGACGACTAC
GATCTATTGGATGCCAGCATTTTGAGTGATAATAAATTAGGATTTGTTCA
GCTGCGCGACAATAAATTGAAAATTCAAGAAGCCGCAGGCGCCGATGGTC
AGCGCCTGGCCGGAATGCTTCTCAATGGCGGTGGCGGTGGTGGTGGAGCC
GGAGCGTTTGGCGTCAATGTACCGCTCATACCCTGGGGCCAGGTGCTGCC
GGACAAGGTGGAGGAGACCCTGCCCCATTTCCCGTTTGGCACACGGCCCA
TCGATGGCGCCTGGCAGGTTGTCAACGGCACCCGCTTCAAGTTCTTTGTC
TACTCCGCCTACTTCGACCGGCGCGAAGGAGCACGCCTGGTGCGAGTGGT
GGGCGCCACCAAGACTCGGGGACCGGAGCGGGTGTGGTGTCGATTCTGGT
ACGGACCGAGTGCTGGCAATGGCACCGATGCGGGCTCCTCCACGGCACGT
GCCAAGTACTCCTCGGCCACTGTGATGGCTCGCGTCAAGATTATTCGCGA
GAACTGGAATCTAAAATACAGCGCCTGTTTCATACTGTGCCCGGTACGAA
CTCCACCGCTGTCAGTTCCTCATTTCGTGAGCGTGGTATCCCGTTTGCGT
GCTCCGCCTGGTAATTTGCTGACTCTACGAAACACCGACCAGGATGCGGA
CTTTGCGGCGAGCAGAGCGCGTAATTCGAGTGCCAAGAAAGGATCGCCAG
TGGGTCATCCTCCGCCGAGTGGCGATAACATACCCGATCGCATAGCCGTC
TGCGTGAAACCCTTGCACTTCAACTACGACCAGGCGTTGTATCTTATGGA
GTACTTGGAGTTCTATGCACTGCTGGGTGTGTCCCACTTCACCTTCTACA
ACCACACTTTGGGACCACACGCCTCCTGCGTCCTGGAGAACTATCAAAAG
GGTCTGGTGCCCGGAAATCTGACCGCACACGATTTGGAAGCACTCACACC
AGCGGAGGCAGCCAACAATGCCACGCCCCGTGTTCTAAGGACACAATATC
AACGACCCACGGTCAGCATCCTGCCGTGGAATCTGCGCATGCGTAGCCAG
AAGGAGATTCGAACCGAAGGACTCTTTGCGGCCCTAAACGACTGCCTCTA
CCGCACCATGTATCGCTACAAGTATCTGGCACTGGTGGATCTGGACGAGT
TTATTGTGCCACGCTACTCGGATACGTTGAATGAACTCATTGGATCACTT
AATCAGCGCTTTCGCAATCGCAACACAGGAGCCTATTCCTTCCAGAATGC
CTTCTACTATCTTCAGTTTGCGGATGACAGCCTGGCTAGTTCTGGAATAG
AGGGTGGTAATGACCAACTGGCCAGAGTACGGGCCAATCTAGTCACTCAA
CGTAAAACACGAAGGGCAAGCTTTCTAGACCAT

BO30521.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG9395-RD 2523 CG9395-PD 243..1842 16..1615 7985 99.9 Plus
CG9395-RC 2523 CG9395-PC 243..1842 16..1615 7985 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9395-RD 3898 CG9395-RD 574..2173 16..1615 7985 99.9 Plus
CG9395-RC 4191 CG9395-RC 867..2466 16..1615 7985 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13351930..13352635 1443..738 3515 99.9 Minus
2L 23513712 2L 13352801..13353212 739..328 2060 100 Minus
2L 23513712 2L 13351668..13351840 1615..1443 865 100 Minus
2L 23513712 2L 13353714..13353836 242..120 615 100 Minus
2L 23513712 2L 13354100..13354207 123..16 540 100 Minus
2L 23513712 2L 13353312..13353401 329..240 450 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:13:09 has no hits.

BO30521.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:21 Download gff for BO30521.complete
Subject Subject Range Query Range Percent Splice Strand
CG9395-RC 244..1843 17..1617 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:52 Download gff for BO30521.complete
Subject Subject Range Query Range Percent Splice Strand
CG9395-RC 868..2467 17..1617 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:06:24 Download gff for BO30521.complete
Subject Subject Range Query Range Percent Splice Strand
CG9395-RC 868..2467 17..1617 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:06:24 Download gff for BO30521.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13351666..13351839 1444..1617 98 <- Minus
2L 13351930..13352633 740..1443 99 <- Minus
2L 13352801..13353210 330..739 100 <- Minus
2L 13353312..13353399 242..329 100 <- Minus
2L 13353715..13353834 122..241 100 <- Minus
2L 13354102..13354206 17..121 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:52 Download gff for BO30521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13351666..13351839 1444..1617 98 <- Minus
arm_2L 13351930..13352633 740..1443 99 <- Minus
arm_2L 13352801..13353210 330..739 100 <- Minus
arm_2L 13353312..13353399 242..329 100 <- Minus
arm_2L 13353715..13353834 122..241 100 <- Minus
arm_2L 13354102..13354206 17..121 100   Minus

BO30521.pep Sequence

Translation from 16 to 1633

> BO30521.pep
MKRGKKQWGTRERSGMSFLIVITFFAVFGLIILTEVFMIDERTHSGMLAM
RAGGGGGASLGGRMGDSMPDYDNVKDDYDLLDASILSDNKLGFVQLRDNK
LKIQEAAGADGQRLAGMLLNGGGGGGGAGAFGVNVPLIPWGQVLPDKVEE
TLPHFPFGTRPIDGAWQVVNGTRFKFFVYSAYFDRREGARLVRVVGATKT
RGPERVWCRFWYGPSAGNGTDAGSSTARAKYSSATVMARVKIIRENWNLK
YSACFILCPVRTPPLSVPHFVSVVSRLRAPPGNLLTLRNTDQDADFAASR
ARNSSAKKGSPVGHPPPSGDNIPDRIAVCVKPLHFNYDQALYLMEYLEFY
ALLGVSHFTFYNHTLGPHASCVLENYQKGLVPGNLTAHDLEALTPAEAAN
NATPRVLRTQYQRPTVSILPWNLRMRSQKEIRTEGLFAALNDCLYRTMYR
YKYLALVDLDEFIVPRYSDTLNELIGSLNQRFRNRNTGAYSFQNAFYYLQ
FADDSLASSGIEGGNDQLARVRANLVTQRKTRRASFLDH

BO30521.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG9395-PD 840 CG9395-PD 82..614 1..533 2807 100 Plus
CG9395-PC 840 CG9395-PC 82..614 1..533 2807 100 Plus