BO30532.complete Sequence
685 bp assembled on 2011-09-30
GenBank Submission: KX796122
> BO30532.complete
GAAGTTATCAGTCGACATGTGGATCGCGAACGAACGCACTATCTGCGCAC
TGATGCCACTGGTGATTTTGGCGACCTGGCAGCTGTGCCTTCTTCCCGGG
ACGGATGCCAAGCACTTGGCCATCAGATTGCGCGACCCTCAAAGCGAAAT
CGAATCGGAAACGGTGCCCCTAGCCCATGTCCACAGCCACAGCCACACGG
ACGAGAGTGGCGTTCGCGGTGCTGCTGCAGTGCATCGTAGGGAGCGGCGG
CAACTCTCCGATTGGCTAATTGCGCCCAACACGCGGTGGTGCGGACGCGG
CAATCTGGCCAATGGAACGTACAACGATCTGGGCGGCGCTTCCAAGGCGG
ACAAATGCTGCCGGAAGCATGATCACTGCAAAATGTGGATCGATGGCATG
TCCAATCGCTATGATCTCTTCAACTATCGACCGTACACGCTGTCACACTG
CAGCTGTGATCTACGGTTCCGCACGTGTCTGAAGATGGCCGGCGACGAGG
ATGCGAACGCCATCGGAAAGCTCTTCTTCAATGTCGTGCAGACGCAGTGT
TTCGGCCTGAAGGCCGAGACCGTTTGCGTTCAGCGGGGCGGCTCCGGAAA
GGAGACCGATCCGTGCCTCAAGGAGGAGGTGCGTCACAAGGCCTTCCTGC
GCGACAACAAGCGGTTCGCAAGCTTTCTAGACCAT
BO30532.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:04:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-RC | 654 | CG1583-PC | 1..651 | 17..667 | 3240 | 99.8 | Plus |
| GIIIspla2-RB | 654 | CG1583-PB | 1..651 | 17..667 | 3240 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:04:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-RC | 1543 | CG1583-RC | 97..747 | 17..667 | 3240 | 99.8 | Plus |
| GIIIspla2-RB | 1212 | CG1583-RB | 97..747 | 17..667 | 3240 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8157724..8158374 | 17..667 | 3240 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:04:32 has no hits.
BO30532.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:53:07 Download gff for
BO30532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 71..721 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:49:15 Download gff for
BO30532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 97..747 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:27 Download gff for
BO30532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 97..747 | 17..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:27 Download gff for
BO30532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8157724..8158374 | 17..669 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:49:15 Download gff for
BO30532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8051757..8052407 | 17..669 | 99 | | Plus |
BO30532.pep Sequence
Translation from 16 to 685
> BO30532.pep
MWIANERTICALMPLVILATWQLCLLPGTDAKHLAIRLRDPQSEIESETV
PLAHVHSHSHTDESGVRGAAAVHRRERRQLSDWLIAPNTRWCGRGNLANG
TYNDLGGASKADKCCRKHDHCKMWIDGMSNRYDLFNYRPYTLSHCSCDLR
FRTCLKMAGDEDANAIGKLFFNVVQTQCFGLKAETVCVQRGGSGKETDPC
LKEEVRHKAFLRDNKRFASFLDH
BO30532.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-PC | 217 | CG1583-PC | 1..217 | 1..217 | 1193 | 100 | Plus |
| GIIIspla2-PB | 217 | CG1583-PB | 1..217 | 1..217 | 1193 | 100 | Plus |
| CG3009-PD | 239 | CG3009-PD | 103..209 | 85..192 | 251 | 44.4 | Plus |
| CG3009-PB | 342 | CG3009-PB | 103..207 | 85..190 | 245 | 44.3 | Plus |
| CG3009-PA | 342 | CG3009-PA | 103..207 | 85..190 | 245 | 44.3 | Plus |
