BO30563.complete Sequence
586 bp assembled on 2011-09-30
GenBank Submission: KX795842
> BO30563.complete
GAAGTTATCAGTCGACATGAGTTTGGTGTGGACTTTGATCGCCGGATTTC
TCTATGCGGAAATCGCACTGGTCCTTCTGCTGGTGCTGCCGGTGCTCACT
CCTTACCGCTGGAACCGGTTCTTCAAGTCCAAATTCCTATCGATGTTGGG
ACAACAGGCGCACATATATTTCCTGCTGATCATGGGAATTCTGGTCATTT
TCCTCCTGGAGGCCATTCGCGAGATGCGCAAGTACTCCGGCTTGCAGCAG
TCTAACGAGGTCCACTTGAACGTGGAGATGCAGCACAGCATGAAGCTGTT
CCGTGCCCAGCGGAACTTCTACATCTCTGGATTCGCCATTTTCCTTGCCC
TGGTCATCCGGCGACTGGTAAACTTGATCTGCACCCAGGCCAATCTCATG
GCCCAGAGCGAGGCTTCCTTCAAGCAGGCACAGAGCGCCACTGCAGCCGC
ACGTTCCTTGCTGGAGAACAAGAACACCGAGAAGGCCAAGGAAGCCGGCG
AGGATACCACTCTCATCGAGCTGTCAAGACTGCGGAGACGTGTGCAAGGA
CTCACCGCCCGAGTGTCCGCAAGCTTTCTAGACCAT
BO30563.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:13:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13887-RD | 555 | CG13887-PD | 1..552 | 17..568 | 2760 | 100 | Plus |
CG13887-RE | 687 | CG13887-PE | 1..506 | 17..522 | 2530 | 100 | Plus |
CG13887-RB | 687 | CG13887-PB | 1..506 | 17..522 | 2530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:13:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13887-RD | 1306 | CG13887-RD | 158..709 | 17..568 | 2760 | 100 | Plus |
CG13887-RE | 1446 | CG13887-RE | 261..766 | 17..522 | 2530 | 100 | Plus |
CG13887-RB | 1262 | CG13887-RB | 261..766 | 17..522 | 2530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:13:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 838121..838624 | 17..520 | 2520 | 100 | Plus |
3L | 28110227 | 3L | 839101..839150 | 519..568 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:13:16 has no hits.
BO30563.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:53:14 Download gff for
BO30563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13887-RD | 162..713 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:08:27 Download gff for
BO30563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13887-RD | 158..709 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:13:31 Download gff for
BO30563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13887-RD | 158..709 | 17..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:13:31 Download gff for
BO30563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 838121..838624 | 17..520 | 100 | -> | Plus |
3L | 839103..839150 | 521..570 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:08:27 Download gff for
BO30563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 838121..838624 | 17..520 | 100 | -> | Plus |
arm_3L | 839103..839150 | 521..570 | 96 | | Plus |
BO30563.pep Sequence
Translation from 16 to 586
> BO30563.pep
MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHI
YFLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRN
FYISGFAIFLALVIRRLVNLICTQANLMAQSEASFKQAQSATAAARSLLE
NKNTEKAKEAGEDTTLIELSRLRRRVQGLTARVSASFLDH
BO30563.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13887-PD | 184 | CG13887-PD | 1..184 | 1..184 | 901 | 100 | Plus |
CG13887-PE | 228 | CG13887-PE | 1..181 | 1..181 | 866 | 97.2 | Plus |
CG13887-PB | 228 | CG13887-PB | 1..181 | 1..181 | 866 | 97.2 | Plus |
CG13887-PC | 228 | CG13887-PC | 1..181 | 1..181 | 866 | 97.2 | Plus |