Clone BO30575 Report

Search the DGRC for BO30575

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:305
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG11839-RB
Protein status:BO30575.pep: Imported from assembly
Sequenced Size:796

Clone Sequence Records

BO30575.complete Sequence

796 bp assembled on 2011-09-30

GenBank Submission: KX798094

> BO30575.complete
GAAGTTATCAGTCGACATGAATAATGGGAATATAAAACGCCTTCAAAAGA
AACTCAGCGTTTCGAAAAAGCCAGCAGTCACTGTGGATTCACCATTGGCA
AAGTATGACTCCTCGGGCATCTTGACCTGCATTATTTGCAGGATTCCTAT
CAAACCCAACGTCTGGAAGGTGCATATAAATTCCAAGCAGCACAAACTGA
ACGTCGATCAGGCTAAGCAGAATAAGGTGGAGAAACCCGTCACCACTACT
GCACCCAAGGATCCTACGGGTCCGTCCACCAAGACTTCAGCTCCTGCCAA
AAACTCCAGCACACTGCCAGATAAAACTCCACAGAGCAGCCAGGAAAAGC
ATCCTCCCCTCATTCAAGAGAAAACTGCCCAGGGAAATGCGAGCAGCAAG
CCTGAGAATGAAACTACTGTCGAGAAACTGCCAGAAAAGTTCTTCGACGA
GGATAAGACCAATAAATCGGAGGCCGCTCGCCTTCAGGACGAGGAATGGC
AGCGATTCCAGCAGGAGATCAAGCGGGCGGACACGGAATCCAGTGAAATT
GTGGCCGACGAGCAGGAGGACATCAATCTCAAGCGACACATCAAGGAGAT
CGACGAGCAGATCGACAACTGGAAGAGATTTATTAAAATTAACGATCAGA
AAAAAGTACTCCTTAGTAAAAAGCGAAGAGTAGACCCCAAGATGGAGGTC
GATCCGGAATTGAGTTCAAGCGAAGAAGATTGCAGTGTGGATGATTTGTT
CGACTGGAGAACGAAAAATCTGCATAGCGCAAGCTTTCTAGACCAT

BO30575.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11839-RB 765 CG11839-PB 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11839-RB 836 CG11839-RB 37..800 15..778 3820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25070203..25070878 103..778 3380 100 Plus
3R 32079331 3R 25069963..25070054 15..106 445 98.9 Plus
Blast to na_te.dros performed on 2014-11-27 12:45:05 has no hits.

BO30575.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:12 Download gff for BO30575.complete
Subject Subject Range Query Range Percent Splice Strand
CG11839-RB 39..800 17..780 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:31:59 Download gff for BO30575.complete
Subject Subject Range Query Range Percent Splice Strand
CG11839-RB 39..800 17..780 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:03:43 Download gff for BO30575.complete
Subject Subject Range Query Range Percent Splice Strand
CG11839-RB 39..800 17..780 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:03:43 Download gff for BO30575.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25069965..25070050 17..102 100 <- Plus
3R 25070203..25070878 103..780 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:31:59 Download gff for BO30575.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20895687..20895772 17..102 100 <- Plus
arm_3R 20895925..20896600 103..780 99   Plus

BO30575.pep Sequence

Translation from 16 to 796

> BO30575.pep
MNNGNIKRLQKKLSVSKKPAVTVDSPLAKYDSSGILTCIICRIPIKPNVW
KVHINSKQHKLNVDQAKQNKVEKPVTTTAPKDPTGPSTKTSAPAKNSSTL
PDKTPQSSQEKHPPLIQEKTAQGNASSKPENETTVEKLPEKFFDEDKTNK
SEAARLQDEEWQRFQQEIKRADTESSEIVADEQEDINLKRHIKEIDEQID
NWKRFIKINDQKKVLLSKKRRVDPKMEVDPELSSSEEDCSVDDLFDWRTK
NLHSASFLDH

BO30575.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG11839-PB 254 CG11839-PB 1..254 1..254 1321 100 Plus