BO30575.complete Sequence
796 bp assembled on 2011-09-30
GenBank Submission: KX798094
> BO30575.complete
GAAGTTATCAGTCGACATGAATAATGGGAATATAAAACGCCTTCAAAAGA
AACTCAGCGTTTCGAAAAAGCCAGCAGTCACTGTGGATTCACCATTGGCA
AAGTATGACTCCTCGGGCATCTTGACCTGCATTATTTGCAGGATTCCTAT
CAAACCCAACGTCTGGAAGGTGCATATAAATTCCAAGCAGCACAAACTGA
ACGTCGATCAGGCTAAGCAGAATAAGGTGGAGAAACCCGTCACCACTACT
GCACCCAAGGATCCTACGGGTCCGTCCACCAAGACTTCAGCTCCTGCCAA
AAACTCCAGCACACTGCCAGATAAAACTCCACAGAGCAGCCAGGAAAAGC
ATCCTCCCCTCATTCAAGAGAAAACTGCCCAGGGAAATGCGAGCAGCAAG
CCTGAGAATGAAACTACTGTCGAGAAACTGCCAGAAAAGTTCTTCGACGA
GGATAAGACCAATAAATCGGAGGCCGCTCGCCTTCAGGACGAGGAATGGC
AGCGATTCCAGCAGGAGATCAAGCGGGCGGACACGGAATCCAGTGAAATT
GTGGCCGACGAGCAGGAGGACATCAATCTCAAGCGACACATCAAGGAGAT
CGACGAGCAGATCGACAACTGGAAGAGATTTATTAAAATTAACGATCAGA
AAAAAGTACTCCTTAGTAAAAAGCGAAGAGTAGACCCCAAGATGGAGGTC
GATCCGGAATTGAGTTCAAGCGAAGAAGATTGCAGTGTGGATGATTTGTT
CGACTGGAGAACGAAAAATCTGCATAGCGCAAGCTTTCTAGACCAT
BO30575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:45:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11839-RB | 765 | CG11839-PB | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:45:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11839-RB | 836 | CG11839-RB | 37..800 | 15..778 | 3820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25070203..25070878 | 103..778 | 3380 | 100 | Plus |
3R | 32079331 | 3R | 25069963..25070054 | 15..106 | 445 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:45:05 has no hits.
BO30575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:12 Download gff for
BO30575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 39..800 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:31:59 Download gff for
BO30575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 39..800 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:03:43 Download gff for
BO30575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11839-RB | 39..800 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:03:43 Download gff for
BO30575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25069965..25070050 | 17..102 | 100 | <- | Plus |
3R | 25070203..25070878 | 103..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:31:59 Download gff for
BO30575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20895687..20895772 | 17..102 | 100 | <- | Plus |
arm_3R | 20895925..20896600 | 103..780 | 99 | | Plus |
BO30575.pep Sequence
Translation from 16 to 796
> BO30575.pep
MNNGNIKRLQKKLSVSKKPAVTVDSPLAKYDSSGILTCIICRIPIKPNVW
KVHINSKQHKLNVDQAKQNKVEKPVTTTAPKDPTGPSTKTSAPAKNSSTL
PDKTPQSSQEKHPPLIQEKTAQGNASSKPENETTVEKLPEKFFDEDKTNK
SEAARLQDEEWQRFQQEIKRADTESSEIVADEQEDINLKRHIKEIDEQID
NWKRFIKINDQKKVLLSKKRRVDPKMEVDPELSSSEEDCSVDDLFDWRTK
NLHSASFLDH
BO30575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11839-PB | 254 | CG11839-PB | 1..254 | 1..254 | 1321 | 100 | Plus |