BO30579.complete Sequence
799 bp assembled on 2011-09-30
GenBank Submission: KX793825
> BO30579.complete
GAAGTTATCAGTCGACATGAAGGCAGTTACTTCAAGAGTGTTGGGTTCGA
TCCTAGTGTTATTATTGATACATTTAACATCAGCAAAAGAAGCGGAGGTT
CACTTAACAAATCCTCCAACAGAATGCAGACTGGTGTGTAATCCAGGGTA
TCATATCGTGGTTAAAAAGGGTACCTTGTATCATAATGGTAGGAAGCTTG
ACGATAATGCACGGTATGCGCCGAAGATGGCGTGTGATTTGGAGAACAGT
TGCAACTTTAAATTTACGCCACAAACATTAAGTTACATGAATACAGCAAT
TAATGTAGGCACACAACTAACTATTAATTACGACTGCAAGCGGGATAACT
TCCAAGGAGATCCGAGAAGGATAACAGATTATACGAAAACGCAAGGATGT
CCGCAAGACTCTTTTGTTCAGAAACACGTCGCATATTTTAACGATGAAAA
TATTGCTCCCAAGAGGGATACACCTGTCGCGCAAAGGGAAAGGGAAATGA
TTGCCATGGGCGTATGTGCTCAGGTCAAACGTTTTAGGCAAAACAACCCA
AGAACGCCCATCGATCCACATCTTGGCACAGTGTACTTGATATTTGACAA
TAGAACAAGTAAAAATGATTTCATGCCGAGTCCTGATGTTAGAAAGTGCC
AACTTAAGCCCAATTCTCTGACCAAGACATACAAGTATGATTGCGAGAGG
AAAGCGGATAAATGGACATGTACTTTTGCCAGCAAGGGAAGGGACTTGGC
CATAAATGACAAGATTACAAGTCACTTAGGAGCAAGCTTTCTAGACCAT
BO30579.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43085-RB | 768 | CG43085-PB | 1..765 | 17..781 | 3825 | 100 | Plus |
| CG43085-RA | 768 | CG43085-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43085-RB | 1193 | CG43085-RB | 298..1062 | 17..781 | 3825 | 100 | Plus |
| CG43085-RA | 925 | CG43085-RA | 30..794 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17645617..17646321 | 781..77 | 3525 | 100 | Minus |
| 3L | 28110227 | 3L | 17646381..17646440 | 76..17 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:47:09 has no hits.
BO30579.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:14 Download gff for
BO30579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43085-RA | 30..794 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:36:42 Download gff for
BO30579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43085-RA | 30..794 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:32 Download gff for
BO30579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43085-RA | 30..794 | 17..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:32 Download gff for
BO30579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17645614..17646321 | 77..783 | 99 | <- | Minus |
| 3L | 17646381..17646440 | 17..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:36:42 Download gff for
BO30579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17638714..17639421 | 77..783 | 99 | <- | Minus |
| arm_3L | 17639481..17639540 | 17..76 | 100 | | Minus |
BO30579.pep Sequence
Translation from 16 to 799
> BO30579.pep
MKAVTSRVLGSILVLLLIHLTSAKEAEVHLTNPPTECRLVCNPGYHIVVK
KGTLYHNGRKLDDNARYAPKMACDLENSCNFKFTPQTLSYMNTAINVGTQ
LTINYDCKRDNFQGDPRRITDYTKTQGCPQDSFVQKHVAYFNDENIAPKR
DTPVAQREREMIAMGVCAQVKRFRQNNPRTPIDPHLGTVYLIFDNRTSKN
DFMPSPDVRKCQLKPNSLTKTYKYDCERKADKWTCTFASKGRDLAINDKI
TSHLGASFLDH
BO30579.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43085-PB | 255 | CG43085-PB | 1..255 | 1..255 | 1376 | 100 | Plus |
| CG43085-PA | 255 | CG43085-PA | 1..255 | 1..255 | 1376 | 100 | Plus |
