Clone BO30591 Report

Search the DGRC for BO30591

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:305
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG42717-RA
Protein status:BO30591.pep: Imported from assembly
Sequenced Size:322

Clone Sequence Records

BO30591.complete Sequence

322 bp assembled on 2011-09-30

GenBank Submission: KX796159

> BO30591.complete
GAAGTTATCAGTCGACATGCGGAATAGCACTCTGATTCTCATCGCCGTCG
TTATGACTGTTTGCATTTTTGCGAATGTAACTGGAGTAACTCGATGCAAG
GGAAAGCCCAAGGATTCAAAGTGTGCCGGGAATCTCGATGGCGGTAACAA
TCGCAAAAGCAAATGCAAGAAATCGGCCAACAAAAATATGTGGCACTACA
ATACACGGACAAAAAACTGCACACAATTCAACTACCTAGGATGTGGTGGC
AATAATAATCGCTGGTGCACAAAAGCATTATGTGAAGCCTGTCGACGACC
AAGAGCAAGCTTTCTAGACCAT

BO30591.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG42717-RA 291 CG42717-PA 1..288 17..304 1425 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG42717-RA 373 CG42717-RA 34..321 17..304 1425 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16032814..16033007 304..111 970 100 Minus
3L 28110227 3L 16033064..16033157 110..17 455 98.9 Minus
Blast to na_te.dros performed on 2014-11-27 12:48:30 has no hits.

BO30591.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:16 Download gff for BO30591.complete
Subject Subject Range Query Range Percent Splice Strand
CG42717-RA 25..312 17..306 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:29 Download gff for BO30591.complete
Subject Subject Range Query Range Percent Splice Strand
CG42717-RA 34..321 17..306 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:05 Download gff for BO30591.complete
Subject Subject Range Query Range Percent Splice Strand
CG42717-RA 34..321 17..306 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:05 Download gff for BO30591.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16032812..16033007 111..306 98 <- Minus
3L 16033064..16033157 17..110 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:29 Download gff for BO30591.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16025912..16026107 111..306 98 <- Minus
arm_3L 16026164..16026257 17..110 98   Minus

BO30591.pep Sequence

Translation from 16 to 322

> BO30591.pep
MRNSTLILIAVVMTVCIFANVTGVTRCKGKPKDSKCAGNLDGGNNRKSKC
KKSANKNMWHYNTRTKNCTQFNYLGCGGNNNRWCTKALCEACRRPRASFL
DH

BO30591.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG42717-PA 96 CG42717-PA 1..96 1..96 541 100 Plus
CG42538-PA 89 CG42538-PA 4..89 11..94 183 37.2 Plus
CG42713-PA 92 CG42713-PA 4..85 9..90 171 32.9 Plus
CG42713-PB 92 CG42713-PB 4..85 9..90 171 32.9 Plus
CG42537-PA 90 CG42537-PA 5..86 6..90 167 38.4 Plus