BO30591.complete Sequence
322 bp assembled on 2011-09-30
GenBank Submission: KX796159
> BO30591.complete
GAAGTTATCAGTCGACATGCGGAATAGCACTCTGATTCTCATCGCCGTCG
TTATGACTGTTTGCATTTTTGCGAATGTAACTGGAGTAACTCGATGCAAG
GGAAAGCCCAAGGATTCAAAGTGTGCCGGGAATCTCGATGGCGGTAACAA
TCGCAAAAGCAAATGCAAGAAATCGGCCAACAAAAATATGTGGCACTACA
ATACACGGACAAAAAACTGCACACAATTCAACTACCTAGGATGTGGTGGC
AATAATAATCGCTGGTGCACAAAAGCATTATGTGAAGCCTGTCGACGACC
AAGAGCAAGCTTTCTAGACCAT
BO30591.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:48:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-RA | 291 | CG42717-PA | 1..288 | 17..304 | 1425 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-RA | 373 | CG42717-RA | 34..321 | 17..304 | 1425 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:48:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16032814..16033007 | 304..111 | 970 | 100 | Minus |
3L | 28110227 | 3L | 16033064..16033157 | 110..17 | 455 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:48:30 has no hits.
BO30591.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:16 Download gff for
BO30591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 25..312 | 17..306 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:29 Download gff for
BO30591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 34..321 | 17..306 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:05 Download gff for
BO30591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 34..321 | 17..306 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:05 Download gff for
BO30591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16032812..16033007 | 111..306 | 98 | <- | Minus |
3L | 16033064..16033157 | 17..110 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:29 Download gff for
BO30591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16025912..16026107 | 111..306 | 98 | <- | Minus |
arm_3L | 16026164..16026257 | 17..110 | 98 | | Minus |
BO30591.pep Sequence
Translation from 16 to 322
> BO30591.pep
MRNSTLILIAVVMTVCIFANVTGVTRCKGKPKDSKCAGNLDGGNNRKSKC
KKSANKNMWHYNTRTKNCTQFNYLGCGGNNNRWCTKALCEACRRPRASFL
DH
BO30591.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-PA | 96 | CG42717-PA | 1..96 | 1..96 | 541 | 100 | Plus |
CG42538-PA | 89 | CG42538-PA | 4..89 | 11..94 | 183 | 37.2 | Plus |
CG42713-PA | 92 | CG42713-PA | 4..85 | 9..90 | 171 | 32.9 | Plus |
CG42713-PB | 92 | CG42713-PB | 4..85 | 9..90 | 171 | 32.9 | Plus |
CG42537-PA | 90 | CG42537-PA | 5..86 | 6..90 | 167 | 38.4 | Plus |