BO30592.complete Sequence
502 bp assembled on 2011-09-30
GenBank Submission: KX794752
> BO30592.complete
GAAGTTATCAGTCGACATGCAGCAATCTTTGCGCGTGGAACTGCTATTGA
TCGTTTACGGGTTGATTCTCGTTGTCTGGGGAATCAATGGATTAAACATA
CCCGAGTGCAGTGGCCAGAATGGATTTATTAACAATACGCGATCCAATTG
CAATTACTCCCTCATCAATTGCTCTGGCCAGAACTCGATGTTCTGCACGG
ACAACACGACCTGCAATGCCAACTTCACCTGTAGCGACATACTTCCGGTG
GATAATTCAACAGCACTACCCATAAGCACAACTCCCAATGTGGTAACCAC
AGCCTCGACAACTGTTTCACCTTCCGATATTCGACGAGAGTGTCGTCAGG
GTGTTACCAAAAGATTTAGCTATCCGCAGAATTGTAACTACTTCTACTAT
TGCGTTGATGGCTTTCTGCTGGTGGAGCAATGTCCTATTGGCTACGCATT
CGATCCCCAAACTGGAGCTTGTGGTGGACGTACGGCAAGCTTTCTAGACC
AT
BO30592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:48:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42728-RA | 471 | CG42728-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42728-RA | 577 | CG42728-RA | 16..483 | 17..484 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:48:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15527714..15528181 | 484..17 | 2340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:48:53 has no hits.
BO30592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:16 Download gff for
BO30592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42728-RA | 16..483 | 17..486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:38 Download gff for
BO30592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42728-RA | 16..483 | 17..486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:15 Download gff for
BO30592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42728-RA | 16..483 | 17..486 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:15 Download gff for
BO30592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15527712..15528181 | 17..486 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:38 Download gff for
BO30592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15520812..15521281 | 17..486 | 99 | | Minus |
BO30592.pep Sequence
Translation from 16 to 502
> BO30592.pep
MQQSLRVELLLIVYGLILVVWGINGLNIPECSGQNGFINNTRSNCNYSLI
NCSGQNSMFCTDNTTCNANFTCSDILPVDNSTALPISTTPNVVTTASTTV
SPSDIRRECRQGVTKRFSYPQNCNYFYYCVDGFLLVEQCPIGYAFDPQTG
ACGGRTASFLDH
BO30592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42728-PA | 156 | CG42728-PA | 1..156 | 1..156 | 850 | 100 | Plus |
CG42729-PA | 185 | CG42729-PA | 4..172 | 10..152 | 163 | 28.2 | Plus |