Clone BO30592 Report

Search the DGRC for BO30592

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:305
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG42728-RA
Protein status:BO30592.pep: Imported from assembly
Sequenced Size:502

Clone Sequence Records

BO30592.complete Sequence

502 bp assembled on 2011-09-30

GenBank Submission: KX794752

> BO30592.complete
GAAGTTATCAGTCGACATGCAGCAATCTTTGCGCGTGGAACTGCTATTGA
TCGTTTACGGGTTGATTCTCGTTGTCTGGGGAATCAATGGATTAAACATA
CCCGAGTGCAGTGGCCAGAATGGATTTATTAACAATACGCGATCCAATTG
CAATTACTCCCTCATCAATTGCTCTGGCCAGAACTCGATGTTCTGCACGG
ACAACACGACCTGCAATGCCAACTTCACCTGTAGCGACATACTTCCGGTG
GATAATTCAACAGCACTACCCATAAGCACAACTCCCAATGTGGTAACCAC
AGCCTCGACAACTGTTTCACCTTCCGATATTCGACGAGAGTGTCGTCAGG
GTGTTACCAAAAGATTTAGCTATCCGCAGAATTGTAACTACTTCTACTAT
TGCGTTGATGGCTTTCTGCTGGTGGAGCAATGTCCTATTGGCTACGCATT
CGATCCCCAAACTGGAGCTTGTGGTGGACGTACGGCAAGCTTTCTAGACC
AT

BO30592.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG42728-RA 471 CG42728-PA 1..468 17..484 2340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG42728-RA 577 CG42728-RA 16..483 17..484 2340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15527714..15528181 484..17 2340 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:48:53 has no hits.

BO30592.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:16 Download gff for BO30592.complete
Subject Subject Range Query Range Percent Splice Strand
CG42728-RA 16..483 17..486 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:38 Download gff for BO30592.complete
Subject Subject Range Query Range Percent Splice Strand
CG42728-RA 16..483 17..486 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:15 Download gff for BO30592.complete
Subject Subject Range Query Range Percent Splice Strand
CG42728-RA 16..483 17..486 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:15 Download gff for BO30592.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15527712..15528181 17..486 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:38 Download gff for BO30592.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15520812..15521281 17..486 99   Minus

BO30592.pep Sequence

Translation from 16 to 502

> BO30592.pep
MQQSLRVELLLIVYGLILVVWGINGLNIPECSGQNGFINNTRSNCNYSLI
NCSGQNSMFCTDNTTCNANFTCSDILPVDNSTALPISTTPNVVTTASTTV
SPSDIRRECRQGVTKRFSYPQNCNYFYYCVDGFLLVEQCPIGYAFDPQTG
ACGGRTASFLDH

BO30592.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG42728-PA 156 CG42728-PA 1..156 1..156 850 100 Plus
CG42729-PA 185 CG42729-PA 4..172 10..152 163 28.2 Plus